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4S0W

Wild type T4 lysozyme structure

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0009253biological_processpeptidoglycan catabolic process
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0030430cellular_componenthost cell cytoplasm
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0044659biological_processviral release from host cell by cytolysis
B0003796molecular_functionlysozyme activity
B0009253biological_processpeptidoglycan catabolic process
B0016798molecular_functionhydrolase activity, acting on glycosyl bonds
B0016998biological_processcell wall macromolecule catabolic process
B0030430cellular_componenthost cell cytoplasm
B0031640biological_processkilling of cells of another organism
B0042742biological_processdefense response to bacterium
B0044659biological_processviral release from host cell by cytolysis
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 201
ChainResidue
ATHR142
APRO143
AASN144
AARG145
AGOL207
AHOH437
AHOH454
BLYS162
BHOH358

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 202
ChainResidue
AARG14
ALEU15
ALYS16
AHOH331
BGLN69
BHOH350

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 203
ChainResidue
ATHR157
ATRP158

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE EPE A 204
ChainResidue
AGLY30
AHIS31
ALEU32
AASP70
APHE104
AGLN105
AHOH412
AHOH414
AHOH418
BTHR109

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 205
ChainResidue
ASER36
BSER117

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 206
ChainResidue
ASER117
AHOH307
BSER36

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 207
ChainResidue
ALEU79
ALYS85
AASN144
AARG148
ASO4201

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 B 201
ChainResidue
BASN144
BARG148

site_idAC9
Number of Residues11
DetailsBINDING SITE FOR RESIDUE EPE B 202
ChainResidue
BGLY30
BHIS31
BLEU32
BASP70
BPHE104
BGLN105
BMET106
BHOH316
BHOH404
BHOH405
BHOH408

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 203
ChainResidue
ALYS35
BPHE114
BTRP138

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL B 204
ChainResidue
BARG14
BLEU15
BLYS16

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL B 205
ChainResidue
BTHR142
BPRO143
BASN144
BARG145

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_04110, ECO:0000269|PubMed:3382407, ECO:0000269|PubMed:7831309, ECO:0000269|PubMed:8266098
ChainResidueDetails
AGLU11
BGLU11

site_idSWS_FT_FI2
Number of Residues2
DetailsACT_SITE: Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_04110, ECO:0000269|PubMed:1892846, ECO:0000269|PubMed:3382407, ECO:0000269|PubMed:7831309, ECO:0000269|PubMed:8266098
ChainResidueDetails
AASP20
BASP20

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:8266098
ChainResidueDetails
ALEU32
APHE104
BLEU32
BPHE104

site_idSWS_FT_FI4
Number of Residues4
DetailsBINDING: BINDING => ECO:0000303|PubMed:7831309
ChainResidueDetails
ASER117
AASN132
BSER117
BASN132

Catalytic Information from CSA
site_idMCSA1
Number of Residues2
DetailsM-CSA 921
ChainResidueDetails
AGLU11proton shuttle (general acid/base)
AASP20covalent catalysis

site_idMCSA2
Number of Residues2
DetailsM-CSA 921
ChainResidueDetails
BGLU11proton shuttle (general acid/base)
BASP20covalent catalysis

225946

PDB entries from 2024-10-09

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