4QNU
Crystal structure of CmoB bound with Cx-SAM in P21212
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0002098 | biological_process | tRNA wobble uridine modification |
| A | 0006400 | biological_process | tRNA modification |
| A | 0008033 | biological_process | tRNA processing |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| B | 0002098 | biological_process | tRNA wobble uridine modification |
| B | 0006400 | biological_process | tRNA modification |
| B | 0008033 | biological_process | tRNA processing |
| B | 0016740 | molecular_function | transferase activity |
| B | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| C | 0002098 | biological_process | tRNA wobble uridine modification |
| C | 0006400 | biological_process | tRNA modification |
| C | 0008033 | biological_process | tRNA processing |
| C | 0016740 | molecular_function | transferase activity |
| C | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| D | 0002098 | biological_process | tRNA wobble uridine modification |
| D | 0006400 | biological_process | tRNA modification |
| D | 0008033 | biological_process | tRNA processing |
| D | 0016740 | molecular_function | transferase activity |
| D | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| E | 0002098 | biological_process | tRNA wobble uridine modification |
| E | 0006400 | biological_process | tRNA modification |
| E | 0008033 | biological_process | tRNA processing |
| E | 0016740 | molecular_function | transferase activity |
| E | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| F | 0002098 | biological_process | tRNA wobble uridine modification |
| F | 0006400 | biological_process | tRNA modification |
| F | 0008033 | biological_process | tRNA processing |
| F | 0016740 | molecular_function | transferase activity |
| F | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| G | 0002098 | biological_process | tRNA wobble uridine modification |
| G | 0006400 | biological_process | tRNA modification |
| G | 0008033 | biological_process | tRNA processing |
| G | 0016740 | molecular_function | transferase activity |
| G | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| H | 0002098 | biological_process | tRNA wobble uridine modification |
| H | 0006400 | biological_process | tRNA modification |
| H | 0008033 | biological_process | tRNA processing |
| H | 0016740 | molecular_function | transferase activity |
| H | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 18 |
| Details | BINDING SITE FOR RESIDUE GEK A 401 |
| Chain | Residue |
| A | LYS91 |
| A | GLU182 |
| A | MET196 |
| A | GLY197 |
| A | TYR200 |
| A | ARG202 |
| A | ARG315 |
| A | HOH538 |
| A | HOH578 |
| A | HOH580 |
| A | LYS110 |
| A | GLY130 |
| A | GLY132 |
| A | ASP152 |
| A | THR154 |
| A | PHE157 |
| A | GLY180 |
| A | ILE181 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PO4 A 402 |
| Chain | Residue |
| A | ILE181 |
| A | ARG202 |
| A | SER204 |
| A | GLU207 |
| A | HIS208 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PO4 A 403 |
| Chain | Residue |
| A | ILE141 |
| A | ARG173 |
| A | HOH508 |
| A | HOH554 |
| F | GLU287 |
| site_id | AC4 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE GEK B 401 |
| Chain | Residue |
| B | LYS91 |
| B | TRP105 |
| B | LYS110 |
| B | VAL129 |
| B | GLY130 |
| B | GLY132 |
| B | ASP152 |
| B | THR154 |
| B | PHE157 |
| B | GLY180 |
| B | ILE181 |
| B | GLU182 |
| B | MET196 |
| B | GLY197 |
| B | TYR200 |
| B | ARG202 |
| B | ARG315 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE PO4 B 402 |
| Chain | Residue |
| B | ILE181 |
| B | ARG202 |
| B | SER204 |
| B | HIS208 |
| B | HOH504 |
| B | HOH505 |
| site_id | AC6 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE GEK C 401 |
| Chain | Residue |
| C | LYS91 |
| C | LYS110 |
| C | GLY130 |
| C | ASP152 |
| C | THR154 |
| C | PHE157 |
| C | GLY180 |
| C | ILE181 |
| C | GLU182 |
| C | MET196 |
| C | GLY197 |
| C | TYR200 |
| C | ARG202 |
| C | ARG315 |
| C | HOH503 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PO4 C 402 |
| Chain | Residue |
| C | ILE181 |
| C | GLU182 |
| C | ARG202 |
| C | HIS208 |
| C | GLN211 |
| site_id | AC8 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE GEK D 401 |
| Chain | Residue |
| D | LYS91 |
| D | LYS110 |
| D | VAL129 |
| D | GLY130 |
| D | GLY132 |
| D | ASP152 |
| D | THR154 |
| D | PHE157 |
| D | GLY180 |
| D | ILE181 |
| D | GLU182 |
| D | MET196 |
| D | GLY197 |
| D | TYR200 |
| D | ARG202 |
| D | ARG315 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE PO4 D 402 |
| Chain | Residue |
| D | ILE181 |
| D | GLU182 |
| D | ARG202 |
| D | HIS208 |
| site_id | BC1 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE GEK E 401 |
| Chain | Residue |
| E | PHE157 |
| E | GLY180 |
| E | ILE181 |
| E | GLU182 |
| E | MET196 |
| E | GLY197 |
| E | TYR200 |
| E | ARG202 |
| E | ARG315 |
| E | LYS91 |
| E | TRP105 |
| E | LYS110 |
| E | GLY130 |
| E | GLY132 |
| E | ASP152 |
| E | PRO153 |
| E | THR154 |
| site_id | BC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE PO4 E 402 |
| Chain | Residue |
| E | ILE181 |
| E | ARG202 |
| E | SER204 |
| E | GLU207 |
| E | HIS208 |
| E | GLN211 |
| site_id | BC3 |
| Number of Residues | 17 |
| Details | BINDING SITE FOR RESIDUE GEK F 401 |
| Chain | Residue |
| F | LYS91 |
| F | LYS110 |
| F | GLY130 |
| F | ASP152 |
| F | THR154 |
| F | PHE157 |
| F | GLY180 |
| F | ILE181 |
| F | GLU182 |
| F | MET196 |
| F | GLY197 |
| F | TYR200 |
| F | ARG202 |
| F | ARG315 |
| F | HOH504 |
| F | HOH519 |
| F | HOH572 |
| site_id | BC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PO4 F 402 |
| Chain | Residue |
| F | ILE181 |
| F | ARG202 |
| F | SER204 |
| F | HIS208 |
| F | GLN211 |
| site_id | BC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PO4 F 403 |
| Chain | Residue |
| A | GLU287 |
| F | ILE141 |
| F | GLY144 |
| F | HOH512 |
| F | HOH559 |
| site_id | BC6 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE GEK G 401 |
| Chain | Residue |
| G | LYS91 |
| G | TRP105 |
| G | LYS110 |
| G | GLY130 |
| G | ASP152 |
| G | PRO153 |
| G | THR154 |
| G | PHE157 |
| G | GLY180 |
| G | ILE181 |
| G | GLU182 |
| G | MET196 |
| G | GLY197 |
| G | TYR200 |
| G | ARG202 |
| G | ARG315 |
| site_id | BC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE PO4 G 402 |
| Chain | Residue |
| G | ILE181 |
| G | ARG202 |
| G | SER204 |
| G | HIS208 |
| G | HOH540 |
| site_id | BC8 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE GEK H 401 |
| Chain | Residue |
| H | LYS91 |
| H | LYS110 |
| H | GLY130 |
| H | GLY132 |
| H | ASP152 |
| H | THR154 |
| H | PHE157 |
| H | GLY180 |
| H | ILE181 |
| H | GLU182 |
| H | MET196 |
| H | GLY197 |
| H | TYR200 |
| H | ARG202 |
| H | ARG315 |
| site_id | BC9 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE PO4 H 402 |
| Chain | Residue |
| H | ILE181 |
| H | ARG202 |
| H | GLU207 |
| H | HIS208 |
| H | GLN211 |
| H | HOH509 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 80 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01590","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
