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4QJV

The X-ray crystal structure of Rpo3/Rpo11 heterodimer of euryarchaeal RNA polymerase from Thermococcus kodakarensis

Functional Information from GO Data
ChainGOidnamespacecontents
A0000428cellular_componentDNA-directed RNA polymerase complex
A0003677molecular_functionDNA binding
A0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
A0005737cellular_componentcytoplasm
A0006351biological_processDNA-templated transcription
A0016779molecular_functionnucleotidyltransferase activity
A0034062molecular_function5'-3' RNA polymerase activity
A0046983molecular_functionprotein dimerization activity
B0000428cellular_componentDNA-directed RNA polymerase complex
B0003677molecular_functionDNA binding
B0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
B0005737cellular_componentcytoplasm
B0006351biological_processDNA-templated transcription
B0016779molecular_functionnucleotidyltransferase activity
B0034062molecular_function5'-3' RNA polymerase activity
B0046983molecular_functionprotein dimerization activity
C0000428cellular_componentDNA-directed RNA polymerase complex
C0003677molecular_functionDNA binding
C0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
C0005737cellular_componentcytoplasm
C0006351biological_processDNA-templated transcription
C0016779molecular_functionnucleotidyltransferase activity
C0034062molecular_function5'-3' RNA polymerase activity
C0046983molecular_functionprotein dimerization activity
D0000428cellular_componentDNA-directed RNA polymerase complex
D0003677molecular_functionDNA binding
D0003899molecular_functionDNA-directed 5'-3' RNA polymerase activity
D0005737cellular_componentcytoplasm
D0006351biological_processDNA-templated transcription
D0016779molecular_functionnucleotidyltransferase activity
D0034062molecular_function5'-3' RNA polymerase activity
D0046983molecular_functionprotein dimerization activity
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PO4 B 101
ChainResidue
BHIS22
BPRO48
BARG53
BHOH255
DHIS22
DARG53
DHOH144
DHOH194

Functional Information from PROSITE/UniProt
site_idPS00446
Number of Residues41
DetailsRNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NALRRtilsevptfAvdeVefleNdSalfDEiIAhRLAMIP
ChainResidueDetails
AASN27-PRO67

site_idPS01154
Number of Residues32
DetailsRNA_POL_L_13KD RNA polymerases L / 13 to 16 Kd subunits signature. LegEdHTFaNlLtetLhenehVtfagYtieHP
ChainResidueDetails
BLEU17-PRO48

223166

PDB entries from 2024-07-31

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