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4QCB

Protein-DNA complex of Vaccinia virus D4 with double-stranded non-specific DNA

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004844molecular_functionuracil DNA N-glycosylase activity
A0006281biological_processDNA repair
A0016787molecular_functionhydrolase activity
A0016799molecular_functionhydrolase activity, hydrolyzing N-glycosyl compounds
B0003677molecular_functionDNA binding
B0004844molecular_functionuracil DNA N-glycosylase activity
B0006281biological_processDNA repair
B0016787molecular_functionhydrolase activity
B0016799molecular_functionhydrolase activity, hydrolyzing N-glycosyl compounds
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 301
ChainResidue
AASP68
APRO69
ATYR70
APRO78
APHE79
AASN120
AHOH410

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 302
ChainResidue
ATYR136
ALYS139
AILE140
AGLU32
AVAL33

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 303
ChainResidue
AILE67
ATYR122
AASP162
AILE166
ALYS169

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 301
ChainResidue
BASP68
BPRO69
BTYR70
BPRO78
BPHE79
BASN120
BHOH426

Functional Information from PROSITE/UniProt
site_idPS00130
Number of Residues10
DetailsU_DNA_GLYCOSYLASE Uracil-DNA glycosylase signature. RVCVcGIDPY
ChainResidueDetails
AARG61-TYR70

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU10072
ChainResidueDetails
AASP68
BASP68

223532

PDB entries from 2024-08-07

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