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4Q6G

Crystal Structure of the C-terminal domain of AcKRS-1 bound with N-acetyl-lysine and ADPNP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0005524molecular_functionATP binding
A0043039biological_processtRNA aminoacylation
Functional Information from PDB Data
site_idAC1
Number of Residues16
DetailsBINDING SITE FOR RESIDUE ANP A 501
ChainResidue
AARG330
ASER399
AGLY421
AGLY423
AARG426
AALY508
AHOH601
AHOH704
AGLU332
AHIS338
ALEU339
APHE342
AMET344
AGLU396
ALEU397
ASER398

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 502
ChainResidue
AASN241
AARG439
AALA440
AASN448
AGLY449
AHOH639

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 503
ChainResidue
ATYR242
ALYS245
ALEU246
AGLU249
ALYS431
AHIS432

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 504
ChainResidue
AASP256
AARG257
AHIS369

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 505
ChainResidue
AASP373
ALYS375
AMET391
AHIS392
AGLY393
AHOH693

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 506
ChainResidue
AARG310
AASP313
AGLY412
AASP414
ALYS415
AHOH658

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 507
ChainResidue
ATYR272
AASN307
AARG310
ALYS311
AGLU357
AGLU444
AHOH655
AHOH700

site_idAC8
Number of Residues14
DetailsBINDING SITE FOR RESIDUE ALY A 508
ChainResidue
APRO299
AMET300
AVAL301
AALA302
AARG330
APHE342
AMET344
AASN346
APHE347
APHE348
ATYR384
ATRP417
AANP501
AHOH706

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PDB entries from 2024-07-24

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