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4PZG

Crystal structure of human sorting nexin 10 (SNX10)

Functional Information from GO Data
ChainGOidnamespacecontents
A0001696biological_processgastric acid secretion
A0005515molecular_functionprotein binding
A0005545molecular_function1-phosphatidylinositol binding
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005768cellular_componentendosome
A0005783cellular_componentendoplasmic reticulum
A0005813cellular_componentcentrosome
A0005856cellular_componentcytoskeleton
A0006886biological_processintracellular protein transport
A0006897biological_processendocytosis
A0007032biological_processendosome organization
A0008289molecular_functionlipid binding
A0010008cellular_componentendosome membrane
A0015031biological_processprotein transport
A0016020cellular_componentmembrane
A0016050biological_processvesicle organization
A0019725biological_processcellular homeostasis
A0030030biological_processcell projection organization
A0030141cellular_componentsecretory granule
A0030316biological_processosteoclast differentiation
A0031313cellular_componentextrinsic component of endosome membrane
A0035091molecular_functionphosphatidylinositol binding
A0035630biological_processbone mineralization involved in bone maturation
A0044691biological_processtooth eruption
A0045453biological_processbone resorption
A0046849biological_processbone remodeling
A0051117molecular_functionATPase binding
A0051649biological_processestablishment of localization in cell
A0055074biological_processcalcium ion homeostasis
A0060271biological_processcilium assembly
A0061512biological_processprotein localization to cilium
A0071539biological_processprotein localization to centrosome
A0090651cellular_componentapical cytoplasm
A0097178biological_processruffle assembly
A1901981molecular_functionphosphatidylinositol phosphate binding
A1990830biological_processcellular response to leukemia inhibitory factor
B0001696biological_processgastric acid secretion
B0005515molecular_functionprotein binding
B0005545molecular_function1-phosphatidylinositol binding
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0005768cellular_componentendosome
B0005783cellular_componentendoplasmic reticulum
B0005813cellular_componentcentrosome
B0005856cellular_componentcytoskeleton
B0006886biological_processintracellular protein transport
B0006897biological_processendocytosis
B0007032biological_processendosome organization
B0008289molecular_functionlipid binding
B0010008cellular_componentendosome membrane
B0015031biological_processprotein transport
B0016020cellular_componentmembrane
B0016050biological_processvesicle organization
B0019725biological_processcellular homeostasis
B0030030biological_processcell projection organization
B0030141cellular_componentsecretory granule
B0030316biological_processosteoclast differentiation
B0031313cellular_componentextrinsic component of endosome membrane
B0035091molecular_functionphosphatidylinositol binding
B0035630biological_processbone mineralization involved in bone maturation
B0044691biological_processtooth eruption
B0045453biological_processbone resorption
B0046849biological_processbone remodeling
B0051117molecular_functionATPase binding
B0051649biological_processestablishment of localization in cell
B0055074biological_processcalcium ion homeostasis
B0060271biological_processcilium assembly
B0061512biological_processprotein localization to cilium
B0071539biological_processprotein localization to centrosome
B0090651cellular_componentapical cytoplasm
B0097178biological_processruffle assembly
B1901981molecular_functionphosphatidylinositol phosphate binding
B1990830biological_processcellular response to leukemia inhibitory factor
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE NO3 A 301
ChainResidue
AMET45
ALYS46
ATHR47
AARG154
BMET45
BLYS46
BTHR47
BARG154

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NO3 A 302
ChainResidue
AASN84
AASN87
AASN87
AHIS90
AHIS90
AASN84

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NO3 A 303
ChainResidue
AILE30
AARG53
ATYR54
AARG55
AASN80

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NO3 A 304
ChainResidue
ASER28
ALYS79
AASN80
ALEU81
APE5308
APE5308

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NO3 A 305
ChainResidue
AARG61
AARG61
AGLN65
AGLN65

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PE5 A 306
ChainResidue
ATHR47
ASER48
ACYS49
AASN153
AARG154
BARG154
BPHE156

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PE5 A 307
ChainResidue
AHIS27
AARG55
ATRP59

site_idAC8
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PE5 A 308
ChainResidue
ASER28
ASER28
AASN80
AASN80
ALEU81
ALEU81
APHE83
APHE83
ANO3304
ANO3304

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PE5 A 309
ChainResidue
AGLU75
ALEU76
ASER78
APE5310

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PE5 A 310
ChainResidue
ATRP26
AARG61
ALEU76
APE5309

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE NO3 B 301
ChainResidue
BTYR54
BARG55
BASN80
BTHR138
BLYS139
BTYR140
BNO3304

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NO3 B 302
ChainResidue
BTYR54
BPRO77
BSER78
BLYS79
BASN80
BARG94

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NO3 B 303
ChainResidue
BTYR29
BILE30
BPHE83
BMET85
BARG94
BNO3304

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NO3 B 304
ChainResidue
BARG53
BTYR54
BARG55
BNO3301
BNO3303

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NO3 B 305
ChainResidue
BALA68
BLEU69
BLEU70
BASN86
BASN87
BARG88

site_idBC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NO3 B 306
ChainResidue
BLEU81
BPHE82
BHIS124
BMET152

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PE5 B 307
ChainResidue
BARG61
BGLU75
BLEU76
BLYS139

site_idBC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PE5 B 308
ChainResidue
AASN39
BGLU143
BHIS147
BLYS148

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000305
ChainResidueDetails
AARG53
ALYS79
AARG94
BARG53
BLYS79
BARG94

218853

PDB entries from 2024-04-24

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