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4PVQ

Crystal structure of sulfate-bound human l-asparaginase protein

Replaces:  4GDU
Functional Information from GO Data
ChainGOidnamespacecontents
A0001917cellular_componentphotoreceptor inner segment
A0003948molecular_functionN4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
A0004067molecular_functionasparaginase activity
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006508biological_processproteolysis
A0008233molecular_functionpeptidase activity
A0008798molecular_functionbeta-aspartyl-peptidase activity
A0016787molecular_functionhydrolase activity
A0033345biological_processasparagine catabolic process via L-aspartate
B0001917cellular_componentphotoreceptor inner segment
B0003948molecular_functionN4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
B0004067molecular_functionasparaginase activity
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006508biological_processproteolysis
B0008233molecular_functionpeptidase activity
B0008798molecular_functionbeta-aspartyl-peptidase activity
B0016787molecular_functionhydrolase activity
B0033345biological_processasparagine catabolic process via L-aspartate
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 401
ChainResidue
AALA12
AGLY13
ALEU262
ASER280
ATHR281
AHOH567
BLEU262

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 402
ChainResidue
AILE189
AARG196
AGLY220
AHIS221
AGLY222
AHOH507
ATHR168
AGLY188

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 403
ChainResidue
AASP212
AILE213
AILE238
AGLU239
ALYS270

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A 404
ChainResidue
AMET193
BALA128

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 405
ChainResidue
AGLN124
APHE125
AALA128
AHOH555
BMET193

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 406
ChainResidue
AGLY73
AGLU74
AVAL75
AGLY136
AGLU137
AVAL140
AHOH533

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 407
ChainResidue
ATHR32
ATYR35
AARG39
ALEU307
APRO308

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IOD A 408
ChainResidue
AGLY10
ALEU166
APRO284
AIOD410

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IOD A 409
ChainResidue
ALYS227
BPRO113
BIOD407

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE IOD A 410
ChainResidue
AASN62
ALEU166
AGLY167
AIOD408

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 411
ChainResidue
ALEU55
AGLU56
AASP58
APHE61
AALA63
ACYS65

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 401
ChainResidue
BTHR168
BTHR186
BGLY188
BARG196
BASP199
BGLY220
BGLY222

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 402
ChainResidue
BTHR32
BTYR35
BGLY36
BARG39
BLEU307

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 403
ChainResidue
BASP212
BILE213
BGLU239
BLYS270
BHOH524

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 404
ChainResidue
BHIS0
BMET1
BCYS176
BLYS177
BGLY178
BHOH590

site_idBC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 405
ChainResidue
ALYS17
BTYR254
BSER257
BARG258

site_idBC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 406
ChainResidue
BGLU74
BVAL75
BGLY136
BLEU139

site_idBC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IOD B 407
ChainResidue
ALYS227
AIOD409
BSER88

site_idCC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA B 408
ChainResidue
BLEU55
BGLU56
BASP58
BPHE61
BALA63
BCYS65

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Nucleophile => ECO:0000269|PubMed:19839645, ECO:0000269|PubMed:22861376
ChainResidueDetails
ATHR168
BTHR168

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING:
ChainResidueDetails
AARG196
ATHR219
BARG196
BTHR219

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: N-acetylmethionine => ECO:0007744|PubMed:19413330
ChainResidueDetails
AMET1
BMET1

222415

PDB entries from 2024-07-10

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