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4PP4

Minute virus of mice non-structural protein-1N-terminal nuclease domain reveals a unique Zn2+ coordination in the active site pocket and shows a novel mode of DNA recognition at the origin of replication

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE BME A 301
ChainResidue
AVAL25
APHE26
APHE137
ASER138
AGLN139
ACYS200
AHOH458

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NA A 302
ChainResidue
ASER230
ASER231
AHOH409
AASP91
AVAL116

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 303
ChainResidue
ALYS49
AGLU50
ALEU51
AHOH401

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE NA A 304
ChainResidue
ATHR83
ASER220

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsRegion: {"description":"Ori-binding","evidences":[{"source":"PubMed","id":"25528417","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsMotif: {"description":"RCR-2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01366","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues4
DetailsMotif: {"description":"RCR-3","evidences":[{"source":"PROSITE-ProRule","id":"PRU01366","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsActive site: {"description":"For nuclease activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU01366","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"25528417","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01366","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"25528417","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

243083

PDB entries from 2025-10-15

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