4PG3
Crystal structure of KRS complexed with inhibitor
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
A | 0004824 | molecular_function | lysine-tRNA ligase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0006418 | biological_process | tRNA aminoacylation for protein translation |
A | 0006430 | biological_process | lysyl-tRNA aminoacylation |
B | 0000166 | molecular_function | nucleotide binding |
B | 0003676 | molecular_function | nucleic acid binding |
B | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
B | 0004824 | molecular_function | lysine-tRNA ligase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0006418 | biological_process | tRNA aminoacylation for protein translation |
B | 0006430 | biological_process | lysyl-tRNA aminoacylation |
C | 0000166 | molecular_function | nucleotide binding |
C | 0003676 | molecular_function | nucleic acid binding |
C | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
C | 0004824 | molecular_function | lysine-tRNA ligase activity |
C | 0005524 | molecular_function | ATP binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0006418 | biological_process | tRNA aminoacylation for protein translation |
C | 0006430 | biological_process | lysyl-tRNA aminoacylation |
D | 0000166 | molecular_function | nucleotide binding |
D | 0003676 | molecular_function | nucleic acid binding |
D | 0004812 | molecular_function | aminoacyl-tRNA ligase activity |
D | 0004824 | molecular_function | lysine-tRNA ligase activity |
D | 0005524 | molecular_function | ATP binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0006418 | biological_process | tRNA aminoacylation for protein translation |
D | 0006430 | biological_process | lysyl-tRNA aminoacylation |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 9 |
Details | binding site for residue LYS A 601 |
Chain | Residue |
A | ALA306 |
A | GLU308 |
A | ARG330 |
A | GLU346 |
A | TYR348 |
A | ASN503 |
A | TYR505 |
A | GLU507 |
A | GLY552 |
site_id | AC2 |
Number of Residues | 14 |
Details | binding site for residue KRS A 602 |
Chain | Residue |
A | ARG330 |
A | GLU332 |
A | THR337 |
A | HIS338 |
A | ASN339 |
A | PHE342 |
A | GLU500 |
A | VAL501 |
A | LEU502 |
A | ASN503 |
A | GLY556 |
A | ARG559 |
A | ILE570 |
A | HOH771 |
site_id | AC3 |
Number of Residues | 10 |
Details | binding site for residue LYS B 601 |
Chain | Residue |
B | GLY284 |
B | GLU308 |
B | ARG330 |
B | GLU346 |
B | TYR348 |
B | ASN503 |
B | TYR505 |
B | GLU507 |
B | GLY552 |
B | KRS602 |
site_id | AC4 |
Number of Residues | 15 |
Details | binding site for residue KRS B 602 |
Chain | Residue |
B | ARG330 |
B | GLU332 |
B | THR337 |
B | HIS338 |
B | ASN339 |
B | PHE342 |
B | SER344 |
B | GLU500 |
B | VAL501 |
B | LEU502 |
B | GLY554 |
B | GLY556 |
B | ARG559 |
B | LYS601 |
B | HOH705 |
site_id | AC5 |
Number of Residues | 11 |
Details | binding site for residue LYS C 601 |
Chain | Residue |
C | GLY284 |
C | ALA285 |
C | GLU308 |
C | ARG330 |
C | GLU346 |
C | TYR348 |
C | ASN503 |
C | TYR505 |
C | GLU507 |
C | KRS602 |
C | HOH719 |
site_id | AC6 |
Number of Residues | 13 |
Details | binding site for residue KRS C 602 |
Chain | Residue |
C | ARG330 |
C | GLU332 |
C | THR337 |
C | HIS338 |
C | ASN339 |
C | PHE342 |
C | GLU500 |
C | VAL501 |
C | ASN503 |
C | GLY556 |
C | ARG559 |
C | ILE570 |
C | LYS601 |
site_id | AC7 |
Number of Residues | 11 |
Details | binding site for residue LYS D 601 |
Chain | Residue |
D | GLY284 |
D | ALA306 |
D | GLU308 |
D | ARG330 |
D | GLU346 |
D | TYR348 |
D | ASN503 |
D | TYR505 |
D | GLU507 |
D | GLY552 |
D | HOH747 |
site_id | AC8 |
Number of Residues | 14 |
Details | binding site for residue KRS D 602 |
Chain | Residue |
D | ARG330 |
D | GLU332 |
D | THR337 |
D | HIS338 |
D | ASN339 |
D | PHE342 |
D | GLU500 |
D | VAL501 |
D | ASN503 |
D | GLY554 |
D | GLY556 |
D | ARG559 |
D | ILE570 |
D | HOH717 |