4P4O
Crystal structure of Leishmania infantum polymerase beta: Ternary gap complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
| A | 0005634 | cellular_component | nucleus |
| A | 0006259 | biological_process | DNA metabolic process |
| A | 0006281 | biological_process | DNA repair |
| A | 0006303 | biological_process | double-strand break repair via nonhomologous end joining |
| A | 0006974 | biological_process | DNA damage response |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016779 | molecular_function | nucleotidyltransferase activity |
| A | 0034061 | molecular_function | DNA polymerase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0071897 | biological_process | DNA biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 19 |
| Details | binding site for residue D3T A 401 |
| Chain | Residue |
| A | GLY183 |
| A | LYS291 |
| A | ASN294 |
| A | MG403 |
| A | HOH586 |
| A | HOH615 |
| A | HOH624 |
| A | HOH702 |
| A | HOH703 |
| E | DT6 |
| F | DA5 |
| A | SER184 |
| A | ARG187 |
| A | SER192 |
| A | GLY193 |
| A | ASP194 |
| A | ASP196 |
| A | THR286 |
| A | PHE287 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue NA A 402 |
| Chain | Residue |
| A | THR100 |
| A | VAL102 |
| A | PHE105 |
| E | DA5 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue MG A 403 |
| Chain | Residue |
| A | ASP194 |
| A | ASP196 |
| A | D3T401 |
| A | HOH578 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue NA F 101 |
| Chain | Residue |
| A | HOH508 |
| A | HOH509 |
| F | DT10 |
| F | HOH205 |
| F | HOH209 |
| F | HOH213 |
