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4O8Y

Zinc-free Rpn11 in complex with Rpn8

Functional Information from GO Data
ChainGOidnamespacecontents
A0008233molecular_functionpeptidase activity
A0008237molecular_functionmetallopeptidase activity
B0008233molecular_functionpeptidase activity
B0008237molecular_functionmetallopeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 201
ChainResidue
AILE83
BHIS40
BALA43

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 202
ChainResidue
AASN50
AEDO207
AHOH366
AHOH374
BHOH476

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 203
ChainResidue
AILE83
AALA85
ALYS81

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 204
ChainResidue
AARG100
AALA101
AASP103
ALEU104
APHE154
AHOH384
BGLN145

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 205
ChainResidue
APRO97
ALYS98
ALEU99
AASP135
ATYR137

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 206
ChainResidue
AASP64
ATRP66

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 207
ChainResidue
ACYS80
AILE83
AEDO202
AHOH310
AHOH334

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 208
ChainResidue
AASP20
AGLU23
AHOH307
AHOH365
BGLU209
BHOH409

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO A 209
ChainResidue
AGLU57
APHE67

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 210
ChainResidue
ATYR22
AGLU29
ALYS31
AARG32
ASER95
AGLY96
BTRP117

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 211
ChainResidue
AGLU78
AMET79
ALYS82
AHOH343
BHOH483

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO B 301
ChainResidue
BVAL83
BGLN88
BLEU132

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 302
ChainResidue
ALYS98
AASP124
AHOH423
AHOH439
BTYR196
BHOH467

site_idBC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO B 303
ChainResidue
BILE153
BHOH413
BHOH470

site_idBC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 304
ChainResidue
BSER198
BASN200

site_idBC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 305
ChainResidue
AALA166
BARG42
BPRO143
BSER146
BHOH474
BHOH475
BHOH525

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 306
ChainResidue
ALYS112
ATHR114
AHOH421
BPHE57
BVAL58
BARG135

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 307
ChainResidue
AGLU108
ALYS111
AASN117
AALA139
ALYS152
AHOH406

site_idCC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 308
ChainResidue
BPRO72
BGLN73
BSER74
BVAL78
BALA82
BHOH401
BHOH459

site_idCC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 309
ChainResidue
BMET214
BHIS217

site_idCC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO B 310
ChainResidue
BLYS96
BGLY99
BHOH482

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues135
DetailsDomain: {"description":"MPN","evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsModified residue: {"description":"N-acetylserine","evidences":[{"source":"PubMed","id":"12504901","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues13
DetailsMotif: {"description":"JAMM motif","evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU01182","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246905

PDB entries from 2025-12-31

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