4NMN
Aquifex aeolicus replicative helicase (DnaB) complexed with ADP, at 3.3 resolution
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003678 | molecular_function | DNA helicase activity |
A | 0004386 | molecular_function | helicase activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005829 | cellular_component | cytosol |
A | 0006260 | biological_process | DNA replication |
A | 0006268 | biological_process | DNA unwinding involved in DNA replication |
A | 0006269 | biological_process | DNA replication, synthesis of primer |
A | 0016787 | molecular_function | hydrolase activity |
A | 0016887 | molecular_function | ATP hydrolysis activity |
A | 0032508 | biological_process | DNA duplex unwinding |
A | 0046872 | molecular_function | metal ion binding |
A | 1990077 | cellular_component | primosome complex |
B | 0003677 | molecular_function | DNA binding |
B | 0003678 | molecular_function | DNA helicase activity |
B | 0004386 | molecular_function | helicase activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005829 | cellular_component | cytosol |
B | 0006260 | biological_process | DNA replication |
B | 0006268 | biological_process | DNA unwinding involved in DNA replication |
B | 0006269 | biological_process | DNA replication, synthesis of primer |
B | 0016787 | molecular_function | hydrolase activity |
B | 0016887 | molecular_function | ATP hydrolysis activity |
B | 0032508 | biological_process | DNA duplex unwinding |
B | 0046872 | molecular_function | metal ion binding |
B | 1990077 | cellular_component | primosome complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE ADP A 1001 |
Chain | Residue |
A | PRO208 |
A | PHE428 |
A | THR433 |
A | MG1002 |
A | HOH1104 |
B | ARG417 |
B | GLN418 |
A | GLY209 |
A | GLY211 |
A | LYS212 |
A | THR213 |
A | ARG246 |
A | LEU256 |
A | ARG260 |
A | ARG393 |
site_id | AC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG A 1002 |
Chain | Residue |
A | THR213 |
A | GLU237 |
A | ADP1001 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SR A 1003 |
Chain | Residue |
A | HIS124 |
A | HIS124 |
A | GLU128 |
A | GLU128 |
site_id | AC4 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE ADP B 1001 |
Chain | Residue |
A | PRO420 |
B | ARG207 |
B | GLY209 |
B | MET210 |
B | GLY211 |
B | LYS212 |
B | THR213 |
B | ALA214 |
B | ARG246 |
B | LYS430 |
B | THR433 |
B | MG1002 |
site_id | AC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG B 1002 |
Chain | Residue |
B | THR213 |
B | ASP316 |
B | ADP1001 |