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4NHT

X-ray structure of the complex between hen egg white lysozyme and pentachlorocarbonyliridate(III) (6 days)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005737cellular_componentcytoplasm
A0005783cellular_componentendoplasmic reticulum
A0016231molecular_functionbeta-N-acetylglucosaminidase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0042802molecular_functionidentical protein binding
A0050829biological_processdefense response to Gram-negative bacterium
A0050830biological_processdefense response to Gram-positive bacterium
A0051672biological_processobsolete catabolism by organism of cell wall peptidoglycan in other organism
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE 2T8 A 1001
ChainResidue
ALYS1
AGLU7
AALA11
AARG14
AHIS15
AASP87
AILE88
ATHR89

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE 2T8 A 1002
ChainResidue
AASN27
ALYS33
APHE34
AVAL120
AGLN121
AHOH1119
ASER24

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE 2T8 A 1003
ChainResidue
ALYS13
AASP18
AASN19
ALEU25
AILE124

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE 2T8 A 1004
ChainResidue
AASN59
ATRP62
ATRP63
AALA107
AHOH1177

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE 2T8 A 1005
ChainResidue
AASN46
ATHR47
AASP48
AARG125
AGLY126

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 1006
ChainResidue
ATYR23
AASN113

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 1007
ChainResidue
AASN65
AGLY67
AARG68
ATHR69
AHOH1126

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 1008
ChainResidue
ASER60
ACYS64
ASER72
AARG73
AHOH1101
AHOH1126

Functional Information from PROSITE/UniProt
site_idPS00128
Number of Residues19
DetailsGLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC
ChainResidueDetails
ACYS76-CYS94

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
AGLU35
AASP52

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING:
ChainResidueDetails
AASP101

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 203
ChainResidueDetails
AGLU35hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AASN46
AASP48
ASER50
AASP52covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction
AASN59

219140

PDB entries from 2024-05-01

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