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4NCF

Crystal structure of eukaryotic translation initiation factor eIF5B (399-852) from Saccharomyces cerevisiae in complex with GDP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE GDP A 901
ChainResidue
AHIS413
AASP533
AARG534
ASER598
AALA599
AVAL600
AMG902
AASP415
ATHR416
AGLY417
ALYS418
ATHR419
ALYS420
AASN530
ALYS531

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 902
ChainResidue
ALYS418
ATHR419
AGDP901

site_idAC3
Number of Residues16
DetailsBINDING SITE FOR RESIDUE GDP B 901
ChainResidue
BHIS413
BVAL414
BASP415
BTHR416
BGLY417
BLYS418
BTHR419
BLYS420
BASN530
BLYS531
BASP533
BARG534
BSER598
BALA599
BVAL600
BMG902

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG B 902
ChainResidue
BTHR419
BGDP901

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues14
DetailsRegion: {"description":"G1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsRegion: {"description":"G2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsRegion: {"description":"G3","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues6
DetailsRegion: {"description":"G4","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsRegion: {"description":"G5","evidences":[{"source":"PROSITE-ProRule","id":"PRU01059","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues18
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"24686316","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues13
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"G0S8G9","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"19779198","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

249697

PDB entries from 2026-02-25

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