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4NCF

Crystal structure of eukaryotic translation initiation factor eIF5B (399-852) from Saccharomyces cerevisiae in complex with GDP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE GDP A 901
ChainResidue
AHIS413
AASP533
AARG534
ASER598
AALA599
AVAL600
AMG902
AASP415
ATHR416
AGLY417
ALYS418
ATHR419
ALYS420
AASN530
ALYS531

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG A 902
ChainResidue
ALYS418
ATHR419
AGDP901

site_idAC3
Number of Residues16
DetailsBINDING SITE FOR RESIDUE GDP B 901
ChainResidue
BHIS413
BVAL414
BASP415
BTHR416
BGLY417
BLYS418
BTHR419
BLYS420
BASN530
BLYS531
BASP533
BARG534
BSER598
BALA599
BVAL600
BMG902

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG B 902
ChainResidue
BTHR419
BGDP901

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:G0S8G9
ChainResidueDetails
AASP415
BTHR439
ATHR419
AGLN431
AGLY437
ATHR439
BASP415
BTHR419
BGLN431
BGLY437

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:24686316
ChainResidueDetails
AASN530
AALA599
BASN530
BALA599

site_idSWS_FT_FI3
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:19779198
ChainResidueDetails
ASER405
BSER405

224931

PDB entries from 2024-09-11

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