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4NBS

The structure of aIF2gamma subunit H20F from archaeon Sulfolobus solfataricus complexed with GDPCP

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0001731biological_processformation of translation preinitiation complex
A0003743molecular_functiontranslation initiation factor activity
A0003746molecular_functiontranslation elongation factor activity
A0003924molecular_functionGTPase activity
A0005515molecular_functionprotein binding
A0005525molecular_functionGTP binding
A0006412biological_processtranslation
A0006413biological_processtranslational initiation
A0006414biological_processtranslational elongation
A0016787molecular_functionhydrolase activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues28
DetailsBINDING SITE FOR RESIDUE GCP A 501
ChainResidue
AVAL18
AGLY96
AASN149
ALYS150
AASP152
AVAL153
ASER184
AALA185
ALEU186
AMG502
AHOH601
AASP19
AHOH608
AHOH625
AHOH629
AHOH630
AHOH724
AHOH779
AHOH789
AHOH797
AHOH864
APHE20
AGLY21
ALYS22
ATHR23
ATHR24
AMET45
ATHR46

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 502
ChainResidue
ATHR23
ATHR46
AGCP501
AHOH601
AHOH797

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT A 503
ChainResidue
ALYS212
AGLN244
ATRP389
ASER390

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE FMT A 504
ChainResidue
APHE221

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 505
ChainResidue
AARG219
AALA296
AHOH709

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT A 506
ChainResidue
ALEU312
ASER364
ATHR365
AHOH640
AHOH660

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT A 507
ChainResidue
ATHR366
ALEU367
AARG383
AARG384

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT A 508
ChainResidue
AARG43
AVAL99
AHOH691
AHOH713

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 509
ChainResidue
AVAL223
AARG280
AHOH674

site_idBC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE FMT A 510
ChainResidue
AHOH857
AHOH893

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE FMT A 511
ChainResidue
AARG352
ALYS354

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE FMT A 512
ChainResidue
ALYS347
AVAL348
AASP349
AARG399

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 513
ChainResidue
AARG130
AFMT515
AHOH787

site_idBC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE FMT A 514
ChainResidue
ATRP33
ASER35
AGLU40
AGLY44
AMET45
ATHR46
AHOH797

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FMT A 515
ChainResidue
AARG130
AASP250
ALYS275
AFMT513
AHOH842

site_idBC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 516
ChainResidue
AGLU252
AGLU344
AMET345

site_idBC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE FMT A 517
ChainResidue
ATHR103
AHOH857
AHOH885

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 518
ChainResidue
AVAL151
AVAL154
ATRP327
AASN328
AHOH605
AHOH616

site_idCC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 519
ChainResidue
ATHR54
ATHR70
AHOH641
AHOH653
AHOH712
AHOH848

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00119, ECO:0000269|PubMed:25690901, ECO:0007744|PDB:4RD1
ChainResidueDetails
AASP19
AGLY44

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00119, ECO:0000269|PubMed:16407071, ECO:0000269|PubMed:25690901, ECO:0007744|PDB:2AHO
ChainResidueDetails
ATHR46
ATHR23

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:Q8U082, ECO:0000255|HAMAP-Rule:MF_00119
ChainResidueDetails
ACYS74
ACYS77
ACYS59
ACYS62

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00119, ECO:0000269|PubMed:25690901, ECO:0007744|PDB:4RCY, ECO:0007744|PDB:4RD1
ChainResidueDetails
ASER184
AASN149

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PDB entries from 2024-06-12

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