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4N9U

The role of lysine 200 in the human farnesyl pyrophosphate synthase catalytic mechanism and the mode of inhibition by the nitrogen-containing bisphosphonates

Functional Information from GO Data
ChainGOidnamespacecontents
A0004659molecular_functionprenyltransferase activity
A0008299biological_processisoprenoid biosynthetic process
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG A 401
ChainResidue
AASP103
AASP107
AMG403
ARIS404
AHOH553
AHOH554
AHOH581

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 402
ChainResidue
AHOH550
AHOH551
AHOH552
AHOH582
AASP243
ARIS404

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG A 403
ChainResidue
AASP103
AASP107
AMG401
ARIS404
AHOH556
AHOH557
AHOH558

site_idAC4
Number of Residues26
DetailsBINDING SITE FOR RESIDUE RIS A 404
ChainResidue
ALEU100
AASP103
AASP107
AARG112
AGLN171
AGLY200
ATHR201
AGLN240
AASP243
ALYS257
AMG401
AMG402
AMG403
AHOH540
AHOH549
AHOH550
AHOH551
AHOH552
AHOH554
AHOH557
AHOH558
AHOH562
AHOH563
AHOH579
AHOH581
AHOH582

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 405
ChainResidue
AGLU136
AALA137
ATYR140
ALEU161
ASER164
AHOH523
AHOH564

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 406
ChainResidue
AARG141
AGLN162
AHOH523
AHOH608

Functional Information from PROSITE/UniProt
site_idPS00444
Number of Residues13
DetailsPOLYPRENYL_SYNTHASE_2 Polyprenyl synthases signature 2. MGefFQIqDDYlD
ChainResidueDetails
AMET235-ASP247

site_idPS00723
Number of Residues15
DetailsPOLYPRENYL_SYNTHASE_1 Polyprenyl synthases signature 1. LVaDDim..DssltRRG
ChainResidueDetails
ALEU100-GLY114

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"16684881","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1ZW5","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues5
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsSite: {"description":"Important for determining product chain length","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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