4N99
E. coli sliding clamp in complex with 6-chloro-2,3,4,9-tetrahydro-1H-carbazole-7-carboxylic acid
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003677 | molecular_function | DNA binding |
A | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
A | 0005515 | molecular_function | protein binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006260 | biological_process | DNA replication |
A | 0006261 | biological_process | DNA-templated DNA replication |
A | 0006271 | biological_process | DNA strand elongation involved in DNA replication |
A | 0006974 | biological_process | DNA damage response |
A | 0008408 | molecular_function | 3'-5' exonuclease activity |
A | 0009360 | cellular_component | DNA polymerase III complex |
A | 0030174 | biological_process | regulation of DNA-templated DNA replication initiation |
A | 0030894 | cellular_component | replisome |
A | 0032297 | biological_process | negative regulation of DNA-templated DNA replication initiation |
A | 0042276 | biological_process | error-prone translesion synthesis |
A | 0042802 | molecular_function | identical protein binding |
A | 0042803 | molecular_function | protein homodimerization activity |
A | 0044787 | biological_process | bacterial-type DNA replication |
A | 1990078 | cellular_component | replication inhibiting complex |
A | 1990085 | cellular_component | Hda-beta clamp complex |
B | 0003677 | molecular_function | DNA binding |
B | 0003887 | molecular_function | DNA-directed DNA polymerase activity |
B | 0005515 | molecular_function | protein binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0006260 | biological_process | DNA replication |
B | 0006261 | biological_process | DNA-templated DNA replication |
B | 0006271 | biological_process | DNA strand elongation involved in DNA replication |
B | 0006974 | biological_process | DNA damage response |
B | 0008408 | molecular_function | 3'-5' exonuclease activity |
B | 0009360 | cellular_component | DNA polymerase III complex |
B | 0030174 | biological_process | regulation of DNA-templated DNA replication initiation |
B | 0030894 | cellular_component | replisome |
B | 0032297 | biological_process | negative regulation of DNA-templated DNA replication initiation |
B | 0042276 | biological_process | error-prone translesion synthesis |
B | 0042802 | molecular_function | identical protein binding |
B | 0042803 | molecular_function | protein homodimerization activity |
B | 0044787 | biological_process | bacterial-type DNA replication |
B | 1990078 | cellular_component | replication inhibiting complex |
B | 1990085 | cellular_component | Hda-beta clamp complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE 2J1 A 401 |
Chain | Residue |
A | ARG152 |
A | GLY174 |
A | PRO242 |
A | VAL247 |
A | SER346 |
A | MET362 |
A | HOH523 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PEG A 402 |
Chain | Residue |
A | GLU287 |
A | GLN289 |
A | PG4416 |
A | ARG103 |
A | SER286 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PEG A 403 |
Chain | Residue |
A | TRP122 |
A | GLN217 |
A | ARG224 |
A | HOH520 |
B | ALA38 |
site_id | AC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PG4 A 404 |
Chain | Residue |
A | ALA268 |
A | ARG279 |
A | LEU325 |
B | ASP77 |
B | ARG80 |
B | GLY81 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PEG A 405 |
Chain | Residue |
A | GLN36 |
A | SER43 |
A | ARG56 |
A | ILE231 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PEG A 406 |
Chain | Residue |
A | ARG80 |
A | GLY81 |
A | PRO83 |
B | GLN265 |
site_id | AC7 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE CA A 407 |
Chain | Residue |
A | ALA58 |
site_id | AC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PEG A 408 |
Chain | Residue |
A | SER181 |
A | GLN348 |
A | GLN355 |
A | SER356 |
A | HOH548 |
site_id | AC9 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CA A 409 |
Chain | Residue |
A | GLU316 |
A | LEU366 |
site_id | BC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PG4 A 410 |
Chain | Residue |
A | PRO83 |
A | GLY102 |
A | ARG103 |
A | SER104 |
A | PG4415 |
A | HOH583 |
B | ARG269 |
site_id | BC2 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE CA A 411 |
Chain | Residue |
A | ASP229 |
site_id | BC3 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE PEG A 412 |
Chain | Residue |
A | LEU262 |
A | ALA266 |
A | ARG269 |
A | ILE305 |
A | LEU306 |
A | ASP307 |
A | HOH565 |
B | PG4401 |
B | PEG415 |
site_id | BC4 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE PEG A 413 |
Chain | Residue |
A | GLU64 |
B | PRO189 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PEG A 414 |
Chain | Residue |
A | GLN299 |
A | GLU301 |
B | SER107 |
B | TYR284 |
B | PG4412 |
site_id | BC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PG4 A 415 |
Chain | Residue |
A | PRO112 |
A | ALA114 |
A | ASP115 |
A | PG4410 |
B | ILE305 |
B | LEU306 |
site_id | BC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PG4 A 416 |
Chain | Residue |
A | ARG105 |
A | GLN289 |
A | PEG402 |
A | HOH596 |
B | ILE305 |
B | PG4412 |
site_id | BC8 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE CA A 417 |
Chain | Residue |
A | GLU314 |
site_id | BC9 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE PEG A 418 |
Chain | Residue |
A | ARG137 |
site_id | CC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PG4 B 401 |
Chain | Residue |
A | LEU262 |
A | ARG269 |
A | PEG412 |
A | HOH599 |
B | PRO83 |
B | PEG415 |
B | HOH513 |
site_id | CC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PG4 B 402 |
Chain | Residue |
B | SER18 |
B | ARG73 |
B | PHE76 |
B | ARG80 |
B | PEG416 |
B | HOH551 |
B | HOH576 |
site_id | CC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PEG B 403 |
Chain | Residue |
B | GLU52 |
B | ARG56 |
B | ASN118 |
B | LEU119 |
B | HOH555 |
site_id | CC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PG4 B 404 |
Chain | Residue |
B | LEU82 |
B | HOH580 |
A | ARG152 |
B | ARG7 |
B | ARG80 |
site_id | CC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PEG B 405 |
Chain | Residue |
A | ALA38 |
B | ARG215 |
B | GLN217 |
B | ARG224 |
B | HIS226 |
B | ILE231 |
B | PEG413 |
site_id | CC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PG4 B 406 |
Chain | Residue |
B | LYS264 |
B | GLN265 |
B | ALA268 |
B | ALA271 |
B | ARG279 |
B | LEU325 |
B | ASN329 |
site_id | CC7 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE PEG B 407 |
Chain | Residue |
B | ASP229 |
site_id | CC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE PEG B 408 |
Chain | Residue |
B | GLU50 |
B | TYR153 |
B | ASN156 |
B | GLY157 |
B | PRO196 |
B | ARG197 |
site_id | CC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PEG B 410 |
Chain | Residue |
A | GLU276 |
B | ARG73 |
B | LYS74 |
B | PEG416 |
site_id | DC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE PG4 B 411 |
Chain | Residue |
A | GLN123 |
A | GLU125 |
B | ALA67 |
B | GLY94 |
B | PRO112 |
B | ALA113 |
B | ALA114 |
site_id | DC2 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE PG4 B 412 |
Chain | Residue |
A | GLU301 |
A | GLU303 |
A | PEG414 |
A | PG4416 |
B | ARG105 |
B | SER107 |
B | TYR284 |
B | SER286 |
site_id | DC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PEG B 413 |
Chain | Residue |
B | ASP121 |
B | TRP122 |
B | SER124 |
B | ARG224 |
B | PEG405 |
site_id | DC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE PEG B 414 |
Chain | Residue |
B | SER181 |
B | GLN348 |
B | GLN355 |
B | SER356 |
B | HOH603 |
site_id | DC5 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE PEG B 415 |
Chain | Residue |
A | ARG269 |
A | ILE305 |
A | PEG412 |
B | LEU82 |
B | PRO83 |
B | ALA86 |
B | SER101 |
B | ARG103 |
B | SER104 |
B | PG4401 |
B | HOH600 |
site_id | DC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE PEG B 416 |
Chain | Residue |
B | PRO25 |
B | ARG73 |
B | PG4402 |
B | PEG410 |
site_id | DC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CA B 417 |
Chain | Residue |
B | GLU93 |
B | SER107 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 6 |
Details | BINDING: BINDING => ECO:0000305|PubMed:18191219 |
Chain | Residue | Details |
A | ARG24 | |
A | GLN149 | |
A | TYR153 | |
B | ARG24 | |
B | GLN149 | |
B | TYR153 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:18191219 |
Chain | Residue | Details |
A | ARG73 | |
B | ARG73 |