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4N96

E. coli sliding clamp in complex with 6-nitroindazole

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006271biological_processDNA strand elongation involved in DNA replication
A0006974biological_processDNA damage response
A0008408molecular_function3'-5' exonuclease activity
A0009360cellular_componentDNA polymerase III complex
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0030174biological_processregulation of DNA-templated DNA replication initiation
A0032297biological_processnegative regulation of DNA-templated DNA replication initiation
A0042276biological_processerror-prone translesion synthesis
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
A0044787biological_processbacterial-type DNA replication
B0003677molecular_functionDNA binding
B0003887molecular_functionDNA-directed DNA polymerase activity
B0005515molecular_functionprotein binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006260biological_processDNA replication
B0006261biological_processDNA-templated DNA replication
B0006271biological_processDNA strand elongation involved in DNA replication
B0006974biological_processDNA damage response
B0008408molecular_function3'-5' exonuclease activity
B0009360cellular_componentDNA polymerase III complex
B0016740molecular_functiontransferase activity
B0016779molecular_functionnucleotidyltransferase activity
B0030174biological_processregulation of DNA-templated DNA replication initiation
B0032297biological_processnegative regulation of DNA-templated DNA replication initiation
B0042276biological_processerror-prone translesion synthesis
B0042802molecular_functionidentical protein binding
B0042803molecular_functionprotein homodimerization activity
B0044787biological_processbacterial-type DNA replication
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE 6NI A 401
ChainResidue
ATHR172
AGLY174
AVAL247
ASER346
AVAL360
AHOH611

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CA A 402
ChainResidue
AGLY46
ATHR47
AGLU202

site_idAC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 403
ChainResidue
AALA58

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA A 404
ChainResidue
AGLU6
AHOH587
BASP120
BHOH593

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PEG A 406
ChainResidue
ASER192
APHE241
APRO242
AASP243
AHOH503

site_idAC6
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PEG A 407
ChainResidue
ATRP122
AGLN123
ASER124
AARG224
AHOH539
BGLN36
BALA38
BHOH510
BHOH532

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 408
ChainResidue
AHIS226
AILE231

site_idAC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 409
ChainResidue
ASER181

site_idAC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA B 401
ChainResidue
BGLU6
BGLY85
BGLU87
BHOH680

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues228
DetailsRegion: {"description":"2","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues120
DetailsRegion: {"description":"3","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"18191219","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"18191219","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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