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4N2Y

Crystal structure of orotidine 5'-monophosphate decarboxylase from Archaeoglobus fulgidus

Functional Information from GO Data
ChainGOidnamespacecontents
A0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
A0005829cellular_componentcytosol
A0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
A0006221biological_processpyrimidine nucleotide biosynthetic process
A0016829molecular_functionlyase activity
A0016831molecular_functioncarboxy-lyase activity
A0044205biological_process'de novo' UMP biosynthetic process
B0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
B0005829cellular_componentcytosol
B0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
B0006221biological_processpyrimidine nucleotide biosynthetic process
B0016829molecular_functionlyase activity
B0016831molecular_functioncarboxy-lyase activity
B0044205biological_process'de novo' UMP biosynthetic process
C0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
C0005829cellular_componentcytosol
C0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
C0006221biological_processpyrimidine nucleotide biosynthetic process
C0016829molecular_functionlyase activity
C0016831molecular_functioncarboxy-lyase activity
C0044205biological_process'de novo' UMP biosynthetic process
D0004590molecular_functionorotidine-5'-phosphate decarboxylase activity
D0005829cellular_componentcytosol
D0006207biological_process'de novo' pyrimidine nucleobase biosynthetic process
D0006221biological_processpyrimidine nucleotide biosynthetic process
D0016829molecular_functionlyase activity
D0016831molecular_functioncarboxy-lyase activity
D0044205biological_process'de novo' UMP biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 301
ChainResidue
ALYS51
AASP77
ALYS79
APRO186
AHOH401
AHOH459
AHOH460
BASP82

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"HAMAP-Rule","id":"MF_01200","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues66
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01200","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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