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4MMJ

crystal structure of YafQ from E.coli strain BL21(DE3)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003723molecular_functionRNA binding
A0004518molecular_functionnuclease activity
A0004519molecular_functionendonuclease activity
A0004521molecular_functionRNA endonuclease activity
A0006402biological_processmRNA catabolic process
A0006415biological_processtranslational termination
A0016787molecular_functionhydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 101
ChainResidue
AHIS23
AHIS50
AASP61
AHIS63
AGLN87
APHE91
AHOH242
AHOH313

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 102
ChainResidue
ALYS24
ASER55
AASP67
ATHR86
AHOH214
AHOH225
AHOH239
AARG22

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 103
ChainResidue
ALYS48
AHIS63
APRO66
AHOH204
AHOH230
AHOH281

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

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PDB entries from 2025-12-03

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