4MMJ
crystal structure of YafQ from E.coli strain BL21(DE3)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BSRF BEAMLINE 1W2B |
Synchrotron site | BSRF |
Beamline | 1W2B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-07-09 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.9792 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 41.515, 92.396, 66.825 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.001 - 1.800 |
R-factor | 0.2028 |
Rwork | 0.203 |
R-free | 0.23300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4mmg |
RMSD bond length | 0.007 |
RMSD bond angle | 1.093 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.079 | 0.242 |
Number of reflections | 12280 | |
<I/σ(I)> | 49.1 | 10.2 |
Completeness [%] | 97.3 | 99.8 |
Redundancy | 6.4 | 7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 0.2M (NH4)2SO4, 30%PEG8000, 10mM Pr(Ac)3, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |