Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4MMJ

crystal structure of YafQ from E.coli strain BL21(DE3)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBSRF BEAMLINE 1W2B
Synchrotron siteBSRF
Beamline1W2B
Temperature [K]100
Detector technologyCCD
Collection date2012-07-09
DetectorMAR CCD 165 mm
Wavelength(s)0.9792
Spacegroup nameC 2 2 21
Unit cell lengths41.515, 92.396, 66.825
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.001 - 1.800
R-factor0.2028
Rwork0.203
R-free0.23300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4mmg
RMSD bond length0.007
RMSD bond angle1.093
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.8.2_1309))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.830
High resolution limit [Å]1.8001.800
Rmerge0.0790.242
Number of reflections12280
<I/σ(I)>49.110.2
Completeness [%]97.399.8
Redundancy6.47
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72930.2M (NH4)2SO4, 30%PEG8000, 10mM Pr(Ac)3, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon