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4MKG

Crystal structure of a stable adenylate kinase variant AKv8

Functional Information from GO Data
ChainGOidnamespacecontents
A0004017molecular_functionadenylate kinase activity
A0004550molecular_functionnucleoside diphosphate kinase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006139biological_processnucleobase-containing compound metabolic process
A0008270molecular_functionzinc ion binding
A0009123biological_processnucleoside monophosphate metabolic process
A0009132biological_processnucleoside diphosphate metabolic process
A0009165biological_processnucleotide biosynthetic process
A0016301molecular_functionkinase activity
A0016776molecular_functionphosphotransferase activity, phosphate group as acceptor
A0019205molecular_functionnucleobase-containing compound kinase activity
A0044209biological_processAMP salvage
A0046872molecular_functionmetal ion binding
A0046940biological_processnucleoside monophosphate phosphorylation
A0050145molecular_functionnucleoside monophosphate kinase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 301
ChainResidue
ACYS130
ACYS133
ACYS150
AASP153

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 302
ChainResidue
AAP5303
AHOH412
AHOH434
AHOH439
AHOH445

site_idAC3
Number of Residues41
DetailsBINDING SITE FOR RESIDUE AP5 A 303
ChainResidue
APRO9
AGLY10
AALA11
AGLY12
ALYS13
AGLY14
ATHR15
ATHR31
AGLY32
APHE35
AARG36
AILE53
AGLU57
AVAL59
ATHR64
AGLY85
APHE86
AARG88
AGLN92
AARG123
AARG127
ATHR136
ATYR137
AHIS138
APHE141
AARG160
AARG171
AGLN199
AILE201
AMG302
AHOH404
AHOH412
AHOH414
AHOH417
AHOH419
AHOH434
AHOH445
AHOH451
AHOH456
AHOH471
AHOH688

Functional Information from PROSITE/UniProt
site_idPS00113
Number of Residues12
DetailsADENYLATE_KINASE Adenylate kinase signature. FLLDGFPRtvaQ
ChainResidueDetails
APHE81-GLN92

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues15
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00235, ECO:0000269|PubMed:15100224, ECO:0000269|PubMed:16713575
ChainResidueDetails
AGLY10
ATHR136
ACYS150
AASP153
AARG160
AARG171
AGLN199
ATHR31
AARG36
AGLU57
AGLY85
AGLN92
AARG127
ACYS130
ACYS133

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PDB entries from 2024-07-24

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