4MIY
Crystal Structure of myo-inositol dehydrogenase from Lactobacillus casei in complex with NAD and myo-inositol
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000166 | molecular_function | nucleotide binding |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0019310 | biological_process | inositol catabolic process |
A | 0050112 | molecular_function | inositol 2-dehydrogenase (NAD+) activity |
B | 0000166 | molecular_function | nucleotide binding |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0019310 | biological_process | inositol catabolic process |
B | 0050112 | molecular_function | inositol 2-dehydrogenase (NAD+) activity |
C | 0000166 | molecular_function | nucleotide binding |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0019310 | biological_process | inositol catabolic process |
C | 0050112 | molecular_function | inositol 2-dehydrogenase (NAD+) activity |
D | 0000166 | molecular_function | nucleotide binding |
D | 0016491 | molecular_function | oxidoreductase activity |
D | 0019310 | biological_process | inositol catabolic process |
D | 0050112 | molecular_function | inositol 2-dehydrogenase (NAD+) activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE NAD A 401 |
Chain | Residue |
A | GLY11 |
A | GLU96 |
A | LYS97 |
A | GLY124 |
A | HIS176 |
A | TYR282 |
A | HOH565 |
A | HOH653 |
A | HOH720 |
A | HOH731 |
A | HOH746 |
A | ALA12 |
A | MET13 |
A | ASP35 |
A | ILE36 |
A | VAL73 |
A | SER74 |
A | PHE75 |
A | HIS79 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 402 |
Chain | Residue |
A | ALA12 |
A | MET13 |
A | ALA16 |
A | ILE275 |
A | HOH579 |
A | HOH731 |
site_id | AC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL A 403 |
Chain | Residue |
A | ARG152 |
A | ALA153 |
A | SER154 |
A | GLU241 |
A | HOH529 |
C | ARG152 |
C | GLU241 |
site_id | AC4 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL A 404 |
Chain | Residue |
A | HOH520 |
B | LEU140 |
B | ASP141 |
B | GLY143 |
B | GLY146 |
B | PRO148 |
B | HOH608 |
B | HOH745 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 A 405 |
Chain | Residue |
A | THR26 |
A | GLY27 |
A | HOH577 |
A | HOH682 |
D | THR26 |
D | GLY27 |
site_id | AC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE SO4 A 406 |
Chain | Residue |
A | ARG198 |
A | HOH542 |
A | HOH708 |
A | HOH711 |
C | ALA147 |
C | PRO148 |
C | LYS220 |
site_id | AC7 |
Number of Residues | 25 |
Details | BINDING SITE FOR RESIDUE NAD B 401 |
Chain | Residue |
B | GLY11 |
B | ALA12 |
B | MET13 |
B | ASP35 |
B | ILE36 |
B | VAL73 |
B | SER74 |
B | PHE75 |
B | ALA78 |
B | HIS79 |
B | GLU96 |
B | LYS97 |
B | GLY124 |
B | MET126 |
B | HIS176 |
B | TYR282 |
B | HOH607 |
B | HOH615 |
B | HOH620 |
B | HOH632 |
B | HOH638 |
B | HOH698 |
B | HOH729 |
B | HOH753 |
B | HOH760 |
site_id | AC8 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL B 402 |
Chain | Residue |
B | ALA12 |
B | MET13 |
B | ALA16 |
B | ILE275 |
B | HOH615 |
B | HOH652 |
site_id | AC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL B 403 |
Chain | Residue |
A | GLN266 |
A | THR268 |
B | GLN266 |
B | THR268 |
site_id | BC1 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 B 404 |
Chain | Residue |
B | THR26 |
B | GLY27 |
B | HOH743 |
C | THR26 |
C | GLY27 |
site_id | BC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 B 405 |
Chain | Residue |
B | ARG198 |
B | HOH606 |
B | HOH747 |
D | PRO148 |
D | LYS220 |
site_id | BC3 |
Number of Residues | 25 |
Details | BINDING SITE FOR RESIDUE NAD C 401 |
Chain | Residue |
C | ALA12 |
C | MET13 |
C | ASP35 |
C | ILE36 |
C | VAL73 |
C | SER74 |
C | PHE75 |
C | GLY76 |
C | ALA78 |
C | HIS79 |
C | GLU96 |
C | LYS97 |
C | GLY124 |
C | HIS176 |
C | TYR282 |
C | HOH511 |
C | HOH590 |
C | HOH606 |
C | HOH615 |
C | HOH617 |
C | HOH626 |
C | HOH704 |
C | HOH751 |
C | HOH754 |
C | GLY11 |
site_id | BC4 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL C 402 |
Chain | Residue |
C | ALA16 |
C | HOH528 |
C | HOH581 |
C | HOH702 |
D | ILE36 |
D | ASP37 |
D | HIS38 |
D | HOH691 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL C 403 |
Chain | Residue |
C | ILE259 |
C | GLN266 |
C | THR268 |
C | HOH774 |
D | GLN266 |
site_id | BC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL C 404 |
Chain | Residue |
A | ARG152 |
A | GLU241 |
C | ARG152 |
C | ALA153 |
C | SER154 |
C | GLU241 |
C | HOH595 |
site_id | BC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL C 405 |
Chain | Residue |
C | HOH546 |
C | HOH558 |
C | HOH672 |
C | HOH691 |
C | HOH701 |
site_id | BC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 C 406 |
Chain | Residue |
A | ALA147 |
A | LYS220 |
C | ARG198 |
C | HOH570 |
site_id | BC9 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 C 407 |
Chain | Residue |
C | PHE75 |
C | GLY76 |
C | GLY77 |
C | HOH624 |
site_id | CC1 |
Number of Residues | 30 |
Details | BINDING SITE FOR RESIDUE NAD D 401 |
Chain | Residue |
D | GLY11 |
D | ALA12 |
D | MET13 |
D | ASP35 |
D | ILE36 |
D | VAL73 |
D | SER74 |
D | PHE75 |
D | ALA78 |
D | HIS79 |
D | GLU96 |
D | LYS97 |
D | MET126 |
D | ASP172 |
D | HIS176 |
D | TRP274 |
D | TYR282 |
D | INS402 |
D | HOH501 |
D | HOH580 |
D | HOH608 |
D | HOH619 |
D | HOH644 |
D | HOH651 |
D | HOH671 |
D | HOH707 |
D | HOH738 |
D | HOH744 |
D | HOH758 |
D | HOH762 |
site_id | CC2 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE INS D 402 |
Chain | Residue |
D | LYS97 |
D | HIS155 |
D | ASN157 |
D | ASP172 |
D | THR173 |
D | HIS176 |
D | TYR236 |
D | NAD401 |
D | HOH517 |
D | HOH549 |
D | HOH651 |
site_id | CC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL D 403 |
Chain | Residue |
B | ARG152 |
B | GLU241 |
D | ARG152 |
D | ALA153 |
D | SER154 |
D | GLU241 |
D | HOH532 |
site_id | CC4 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL D 404 |
Chain | Residue |
D | TYR129 |
D | ARG134 |
D | GLU288 |
D | SO4406 |
D | HOH694 |
D | HOH789 |
D | HOH805 |
site_id | CC5 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL D 405 |
Chain | Residue |
C | ARG46 |
D | SER162 |
D | ASN163 |
D | TYR164 |
D | ASN205 |
D | GLU206 |
D | HOH535 |
D | HOH734 |
site_id | CC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 D 406 |
Chain | Residue |
D | ARG134 |
D | TRP183 |
D | GOL404 |