4MDE

Structure of bacterial polynucleotide kinase product complex bound to GDP and DNA

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0002098	biological_process	tRNA wobble uridine modification
A	0006357	biological_process	regulation of transcription by RNA polymerase II
B	0002098	biological_process	tRNA wobble uridine modification
B	0006357	biological_process	regulation of transcription by RNA polymerase II

Functional Information from PDB Data

site_id	AC1
Number of Residues	20
Details	BINDING SITE FOR RESIDUE GDP A 1001

Chain	Residue
A	SER16
A	ARG123
A	MG1002
A	HOH1101
A	HOH1103
A	HOH1184
A	HOH1191
A	HOH1214
A	HOH1226
A	HOH1259
B	LYS118
A	GLY18
C	DC1
A	SER19
A	GLY20
A	LYS21
A	SER22
A	THR23
A	ARG116
A	ARG120

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site_id	AC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MG A 1002

Chain	Residue
A	SER22
A	ARG123
A	GDP1001
A	HOH1101
A	HOH1102
A	HOH1103
C	DC1

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site_id	AC3
Number of Residues	18
Details	BINDING SITE FOR RESIDUE GDP B 1001

Chain	Residue
B	SER16
B	GLY18
B	SER19
B	GLY20
B	LYS21
B	SER22
B	THR23
B	ARG116
B	ARG120
B	MG1002
B	HOH1101
B	HOH1103
B	HOH1149
B	HOH1189
B	HOH1200
B	HOH1222
B	HOH1248
D	DC1

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site_id	AC4
Number of Residues	7
Details	BINDING SITE FOR RESIDUE MG B 1002

Chain	Residue
B	SER22
B	ARG123
B	GDP1001
B	HOH1101
B	HOH1102
B	HOH1103
D	DC1

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