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4M1D

Crystal structure of anti-HIV-1 Fab 447-52D in complex with V3 cyclic peptide MN

Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL L 301
ChainResidue
LPRO59
LARG61
LGLN79
LGOL304
LHOH551
LHOH596
LHOH604

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL L 302
ChainResidue
HSER91
HTRP103
HGLY104
HGOL301
HHOH425
LGLN38
LHOH601
HGLN39
HLEU45

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL L 303
ChainResidue
LVAL19
LTHR20
LHOH493
LHOH598
PPHE317

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL L 304
ChainResidue
LGLN37
LLYS45
LASP82
LGOL301
LHOH630
LHOH656

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL L 305
ChainResidue
LSER26
LSER27
LHOH448
LHOH571
LHOH575
LHOH673

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL L 306
ChainResidue
LGLY29
LASN30
LASN31
LTYR32
LASN51
LLYS66
LHOH597
LHOH642

site_idAC7
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL H 301
ChainResidue
HGLN39
HGLY44
HLEU45
HHOH602
LGLY99
LGLY100
LGLY101
LGOL302
LHOH663

site_idAC8
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL H 302
ChainResidue
HPHE27
HTHR28
HHOH447
HHOH496
MASN30
MASN31
MTYR32
MASN51
MLYS66

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL H 303
ChainResidue
HLYS52
HASP58
LSER65
LTHR72
LLEU95
LHOH413
PGLY314
PHOH407

site_idBC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL H 304
ChainResidue
HARG52
HGLY55
HARG71
HASP73
HHOH410
HHOH638
HHOH686
LPRO109
LHOH499

site_idBC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL H 305
ChainResidue
HPHE97
HTYR100
HHOH534
HHOH666
HHOH698
MASN30
PARG306

site_idBC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL H 306
ChainResidue
HASP101
HVAL102
HTRP103
HHOH462
IGLU100
LALA43
LPRO44
QPHE317
QTYR318

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL M 301
ChainResidue
IALA61
MASP95
MHOH429
MHOH438
MHOH456

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL M 302
ChainResidue
MSER26
MSER27
MSER27
MHOH536
HARG100
HASP100

site_idBC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL M 303
ChainResidue
MPRO59
MARG61
MGLN79

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL I 301
ChainResidue
IGLN39
IGLY44
ILEU45
MPHE87
MGLY99
MGLY100

site_idBC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL I 302
ChainResidue
ILYS105
ITHR107
ITHR108
IHOH473
IHOH558

Functional Information from PROSITE/UniProt
site_idPS00290
Number of Residues7
DetailsIG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YSCQVTH
ChainResidueDetails
LTYR191-HIS197
HTYR194-HIS200

238582

PDB entries from 2025-07-09

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