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4LNU

Nucleotide-free kinesin motor domain in complex with tubulin and a DARPin

Functional Information from GO Data
ChainGOidnamespacecontents
A0000226biological_processmicrotubule cytoskeleton organization
A0000278biological_processmitotic cell cycle
A0005200molecular_functionstructural constituent of cytoskeleton
A0005525molecular_functionGTP binding
A0005737cellular_componentcytoplasm
A0005856cellular_componentcytoskeleton
A0005874cellular_componentmicrotubule
A0007017biological_processmicrotubule-based process
A0016787molecular_functionhydrolase activity
B0000226biological_processmicrotubule cytoskeleton organization
B0000278biological_processmitotic cell cycle
B0003924molecular_functionGTPase activity
B0005200molecular_functionstructural constituent of cytoskeleton
B0005525molecular_functionGTP binding
B0005737cellular_componentcytoplasm
B0005856cellular_componentcytoskeleton
B0005874cellular_componentmicrotubule
B0007017biological_processmicrotubule-based process
B0046872molecular_functionmetal ion binding
K0003777molecular_functionmicrotubule motor activity
K0005524molecular_functionATP binding
K0007018biological_processmicrotubule-based movement
K0008017molecular_functionmicrotubule binding
Functional Information from PDB Data
site_idAC1
Number of Residues28
DetailsBINDING SITE FOR RESIDUE GTP A 501
ChainResidue
AGLY10
AGLY144
ATHR145
AGLY146
AVAL177
AGLU183
AASN206
ATYR224
AASN228
AILE231
AMG502
AGLN11
AHOH601
AHOH603
AHOH621
AHOH627
AHOH629
AHOH636
AHOH664
AHOH810
BLYS254
AALA12
AGLN15
AASP98
AALA99
AASN101
ASER140
AGLY143

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 502
ChainResidue
AGTP501
AHOH601
AHOH602
AHOH627
AHOH636

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 503
ChainResidue
AVAL177
AARG221
ATYR224
AHOH645
AHOH825

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 504
ChainResidue
APRO175
ALYS394
AHOH858
BASN349

site_idAC5
Number of Residues11
DetailsBINDING SITE FOR RESIDUE SO4 A 505
ChainResidue
AARG79
APRO89
ALEU92
AHOH651
AHOH652
AHOH718
AHOH721
DPHE150
DLEU165
DGLN166
DHOH305

site_idAC6
Number of Residues23
DetailsBINDING SITE FOR RESIDUE GDP B 501
ChainResidue
BGLY10
BGLN11
BCYS12
BGLN15
BSER140
BGLY142
BGLY143
BGLY144
BTHR145
BGLY146
BSER178
BGLU183
BASN206
BTYR224
BASN228
BHOH601
BHOH604
BHOH606
BHOH632
BHOH666
BHOH672
BHOH798
BHOH813

site_idAC7
Number of Residues9
DetailsBINDING SITE FOR RESIDUE MES B 502
ChainResidue
AHOH605
BARG158
BPRO162
BASP163
BARG164
BASN197
BASP199
BARG253
BHOH633

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 503
ChainResidue
BPHE296
BTYR312
BASN339
BTYR342
BPHE343
BSO4509

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 504
ChainResidue
BASN54
BARG88
BLYS124
BGLU125
BSER128

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 505
ChainResidue
BASN197
BHIS192
BGLN193
BGLU196

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 506
ChainResidue
BTHR223
BGLY225
BARG278
BHOH816

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 507
ChainResidue
BARG400
BHOH741
BHOH772
DTRP112

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 508
ChainResidue
BHIS107
BTYR108
BGLN193
BHOH779
BHOH812

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 509
ChainResidue
BPHE296
BASP297
BSER298
BASP306
BARG308
BGOL503

site_idBC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 510
ChainResidue
BGLY100
BASN102
BLYS105
BTRP407
BHOH786

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL D 201
ChainResidue
BLYS402
DARG23
DTYR57
DHOH333
DHOH383
DHOH387

site_idBC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL K 401
ChainResidue
AHIS406
KLYS256
KSER259
KASN263
KASP279
KHOH526
KHOH528

site_idBC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 K 402
ChainResidue
KSER88
KSER89
KGLY90
KLYS91
KTHR92

site_idCC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 K 403
ChainResidue
BGLU196
KARG278
KSER280
KLYS281
KHOH543

Functional Information from PROSITE/UniProt
site_idPS00227
Number of Residues7
DetailsTUBULIN Tubulin subunits alpha, beta, and gamma signature. GGGTGSG
ChainResidueDetails
AGLY142-GLY148
BGLY142-GLY148

site_idPS00228
Number of Residues4
DetailsTUBULIN_B_AUTOREG Tubulin-beta mRNA autoregulation signal. MREI
ChainResidueDetails
BMET1-ILE4

site_idPS00411
Number of Residues12
DetailsKINESIN_MOTOR_1 Kinesin motor domain signature. GKLyLVDLAGSE
ChainResidueDetails
KGLY225-GLU236

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING:
ChainResidueDetails
KGLY85

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: N-acetylalanine => ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895, ECO:0007744|PubMed:22814378
ChainResidueDetails
KALA2

site_idSWS_FT_FI3
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
KLYS213

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PDB entries from 2024-10-30

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