Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004645 | molecular_function | 1,4-alpha-oligoglucan phosphorylase activity |
A | 0005829 | cellular_component | cytosol |
A | 0006206 | biological_process | pyrimidine nucleobase metabolic process |
A | 0006213 | biological_process | pyrimidine nucleoside metabolic process |
A | 0006974 | biological_process | DNA damage response |
A | 0009032 | molecular_function | thymidine phosphorylase activity |
A | 0016020 | cellular_component | membrane |
A | 0016154 | molecular_function | pyrimidine-nucleoside phosphorylase activity |
A | 0016757 | molecular_function | glycosyltransferase activity |
A | 0016763 | molecular_function | pentosyltransferase activity |
A | 0046104 | biological_process | thymidine metabolic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE SO4 A 501 |
Chain | Residue |
A | LYS84 |
A | HOH790 |
A | HOH1033 |
A | SER86 |
A | SER95 |
A | SER113 |
A | THR123 |
A | HOH628 |
A | HOH655 |
A | HOH660 |
A | HOH668 |
site_id | AC2 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE SO4 A 502 |
Chain | Residue |
A | GLN5 |
A | ARG9 |
A | ARG12 |
A | ALA175 |
A | THR176 |
A | VAL177 |
A | ASP178 |
A | HOH666 |
A | HOH707 |
A | HOH1039 |
A | HOH1042 |
site_id | AC3 |
Number of Residues | 10 |
Details | BINDING SITE FOR RESIDUE SO4 A 503 |
Chain | Residue |
A | ARG257 |
A | MET338 |
A | THR340 |
A | HIS403 |
A | ASP406 |
A | GLU407 |
A | ASN408 |
A | HOH726 |
A | HOH816 |
A | HOH1057 |
site_id | AC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 504 |
Chain | Residue |
A | HIS15 |
A | ALA16 |
A | HOH1021 |
site_id | AC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 505 |
Chain | Residue |
A | ARG234 |
A | LYS288 |
A | HOH879 |
A | HOH1075 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 506 |
Chain | Residue |
A | GLN372 |
A | ALA373 |
A | HOH812 |
site_id | AC7 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 A 507 |
Chain | Residue |
A | ARG437 |
A | SER439 |
A | HOH760 |
site_id | AC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL A 508 |
Chain | Residue |
A | ARG268 |
A | PHE273 |
A | HOH723 |
A | HOH727 |
A | HOH859 |
site_id | AC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 509 |
Chain | Residue |
A | PHE2 |
A | LEU3 |
A | ALA4 |
A | GLN5 |
A | GLN38 |
A | HOH1031 |
site_id | BC1 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE AZZ A 510 |
Chain | Residue |
A | THR87 |
A | TYR168 |
A | ARG171 |
A | VAL177 |
A | SER186 |
A | LYS190 |
A | PHE210 |
A | MET211 |
A | LEU220 |
A | HOH1023 |
A | HOH1028 |
A | HOH1086 |
Functional Information from PROSITE/UniProt
site_id | PS00647 |
Number of Residues | 16 |
Details | THYMID_PHOSPHORYLASE Thymidine and pyrimidine-nucleoside phosphorylases signature. SGRGLghTGGTlDkLE |
Chain | Residue | Details |
A | SER113-GLU128 | |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 9 |
Details | M-CSA 413 |
Chain | Residue | Details |
A | ASP83 | proton shuttle (general acid/base) |
A | LYS84 | activator, electrostatic stabiliser |
A | HIS85 | electrostatic stabiliser |
A | SER86 | electrostatic stabiliser |
A | THR123 | electrostatic stabiliser |
A | ARG171 | electrostatic stabiliser |
A | SER186 | electrostatic stabiliser |
A | LYS190 | electrostatic stabiliser, proton shuttle (general acid/base) |
A | LYS191 | electrostatic stabiliser |