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4L35

Crystal structure of cruxrhodopsin-3 at pH5 from Haloarcula vallismortis at 2.1 angstrom resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0005216molecular_functionmonoatomic ion channel activity
A0005886cellular_componentplasma membrane
A0006811biological_processmonoatomic ion transport
A0007602biological_processphototransduction
A0009881molecular_functionphotoreceptor activity
A0016020cellular_componentmembrane
A1902600biological_processproton transmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues14
DetailsBINDING SITE FOR RESIDUE RET A 301
ChainResidue
ATYR81
ATRP186
ATYR189
APRO190
ATRP193
ALYS220
ATRP84
ATHR87
ATHR88
ALEU91
AMET116
ATRP142
ASER145
ATHR146

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE 22B A 302
ChainResidue
AGLY29
ATRP30
ATYR41
APHE52
AASN104
ATHR105
ALEU112
APHE148
ASER159

Functional Information from PROSITE/UniProt
site_idPS00327
Number of Residues12
DetailsBACTERIAL_OPSIN_RET Bacterial rhodopsins retinal binding site. FMVIDLvAKvGF
ChainResidueDetails
APHE212-PHE223

site_idPS00950
Number of Residues13
DetailsBACTERIAL_OPSIN_1 Bacterial rhodopsins signature 1. RYsDWlFTTPLLL
ChainResidueDetails
AARG80-LEU92

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues47
DetailsTopological domain: {"description":"Extracellular","evidences":[{"source":"PubMed","id":"25268964","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues17
DetailsTransmembrane: {"description":"Helical; Name=Helix A","evidences":[{"source":"PubMed","id":"25268964","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues40
DetailsTopological domain: {"description":"Cytoplasmic","evidences":[{"source":"PubMed","id":"25268964","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues18
DetailsTransmembrane: {"description":"Helical; Name=Helix B","evidences":[{"source":"PubMed","id":"25268964","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues16
DetailsTransmembrane: {"description":"Helical; Name=Helix C","evidences":[{"source":"PubMed","id":"25268964","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues19
DetailsTransmembrane: {"description":"Helical; Name=Helix D","evidences":[{"source":"PubMed","id":"25268964","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues19
DetailsTransmembrane: {"description":"Helical; Name=Helix E","evidences":[{"source":"PubMed","id":"25268964","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues18
DetailsTransmembrane: {"description":"Helical; Name=Helix F","evidences":[{"source":"PubMed","id":"25268964","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues19
DetailsTransmembrane: {"description":"Helical; Name=Helix G","evidences":[{"source":"PubMed","id":"25268964","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI10
Number of Residues1
DetailsSite: {"description":"Primary proton acceptor","evidences":[{"source":"UniProtKB","id":"P02945","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI11
Number of Residues1
DetailsModified residue: {"description":"N6-(retinylidene)lysine","evidences":[{"source":"PubMed","id":"25268964","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4JR8","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"4L35","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

239803

PDB entries from 2025-08-06

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