4KQQ
CRYSTAL STRUCTURE OF PENICILLIN-BINDING PROTEIN 3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH (5S)-Penicilloic Acid
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000917 | biological_process | division septum assembly |
A | 0004180 | molecular_function | carboxypeptidase activity |
A | 0005886 | cellular_component | plasma membrane |
A | 0006508 | biological_process | proteolysis |
A | 0008360 | biological_process | regulation of cell shape |
A | 0008658 | molecular_function | penicillin binding |
A | 0008955 | molecular_function | peptidoglycan glycosyltransferase activity |
A | 0009002 | molecular_function | serine-type D-Ala-D-Ala carboxypeptidase activity |
A | 0009252 | biological_process | peptidoglycan biosynthetic process |
A | 0043093 | biological_process | FtsZ-dependent cytokinesis |
A | 0051301 | biological_process | cell division |
A | 0071555 | biological_process | cell wall organization |
B | 0000917 | biological_process | division septum assembly |
B | 0004180 | molecular_function | carboxypeptidase activity |
B | 0005886 | cellular_component | plasma membrane |
B | 0006508 | biological_process | proteolysis |
B | 0008360 | biological_process | regulation of cell shape |
B | 0008658 | molecular_function | penicillin binding |
B | 0008955 | molecular_function | peptidoglycan glycosyltransferase activity |
B | 0009002 | molecular_function | serine-type D-Ala-D-Ala carboxypeptidase activity |
B | 0009252 | biological_process | peptidoglycan biosynthetic process |
B | 0043093 | biological_process | FtsZ-dependent cytokinesis |
B | 0051301 | biological_process | cell division |
B | 0071555 | biological_process | cell wall organization |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE VPP A 601 |
Chain | Residue |
A | SER294 |
A | GLY486 |
A | THR487 |
A | ARG489 |
A | TYR498 |
A | TYR503 |
A | PHE533 |
A | GLY534 |
A | GLY535 |
A | IMD605 |
A | HOH733 |
A | LYS297 |
A | HOH768 |
A | VAL333 |
A | SER349 |
A | ASN351 |
A | THR404 |
A | TYR407 |
A | TYR409 |
A | SER485 |
site_id | AC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL A 602 |
Chain | Residue |
A | LYS311 |
A | PRO312 |
A | SER313 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL A 603 |
Chain | Residue |
A | GLY247 |
A | SER248 |
A | ARG284 |
A | VAL523 |
A | ASP525 |
A | HOH705 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL A 604 |
Chain | Residue |
A | TYR268 |
A | ASN269 |
A | ASN272 |
A | ASN275 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE IMD A 605 |
Chain | Residue |
A | TYR328 |
A | THR329 |
A | THR404 |
A | TYR407 |
A | VPP601 |
A | HOH810 |
site_id | AC6 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE VPP B 601 |
Chain | Residue |
B | SER294 |
B | LYS297 |
B | TYR328 |
B | VAL333 |
B | SER349 |
B | ASN351 |
B | THR404 |
B | TYR407 |
B | TYR409 |
B | SER485 |
B | GLY486 |
B | THR487 |
B | ARG489 |
B | TYR498 |
B | TYR503 |
B | PHE533 |
B | GLY534 |
B | GLY535 |
B | HOH730 |
B | HOH757 |
B | HOH771 |
site_id | AC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CL B 602 |
Chain | Residue |
B | VAL491 |
B | ARG504 |
site_id | AC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL B 603 |
Chain | Residue |
B | ARG499 |
B | GLU500 |
B | ASN501 |
site_id | AC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE GOL B 604 |
Chain | Residue |
B | GLY247 |
B | SER248 |
B | ARG284 |
B | PHE290 |
B | VAL523 |
B | ASP525 |
B | HOH718 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL B 605 |
Chain | Residue |
B | ASN501 |
B | PRO527 |
B | SER528 |
B | TYR532 |
site_id | BC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL B 606 |
Chain | Residue |
B | GLU159 |
B | GLN265 |
B | PRO266 |
B | THR267 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Acyl-ester intermediate => ECO:0000255|HAMAP-Rule:MF_02080 |
Chain | Residue | Details |
A | SER294 | |
B | SER294 |