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4KN5

Crystal structure of a putative methylthioadenosine nucleosidase from Weissella paramesenteroides ATCC 33313 (Target NYSGRC-029342 )

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0005829cellular_componentcytosol
A0008782molecular_functionadenosylhomocysteine nucleosidase activity
A0008930molecular_functionmethylthioadenosine nucleosidase activity
A0009086biological_processmethionine biosynthetic process
A0009116biological_processnucleoside metabolic process
A0009164biological_processnucleoside catabolic process
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0019284biological_processL-methionine salvage from S-adenosylmethionine
A0019509biological_processL-methionine salvage from methylthioadenosine
B0003824molecular_functioncatalytic activity
B0005829cellular_componentcytosol
B0008782molecular_functionadenosylhomocysteine nucleosidase activity
B0008930molecular_functionmethylthioadenosine nucleosidase activity
B0009086biological_processmethionine biosynthetic process
B0009116biological_processnucleoside metabolic process
B0009164biological_processnucleoside catabolic process
B0016798molecular_functionhydrolase activity, acting on glycosyl bonds
B0019284biological_processL-methionine salvage from S-adenosylmethionine
B0019509biological_processL-methionine salvage from methylthioadenosine
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 301
ChainResidue
AGLY78
AALA79
ALEU80
AILE153
ASER171
AALA172
AHOH507

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 301
ChainResidue
BSER48
BALA54
BTHR58
BHOH475
BHOH508
ATYR185
BLYS31

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO B 302
ChainResidue
BARG118
BLEU145
BPHE166
BPRO167
BGLU168
BEDO303
BHOH405
BHOH455

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 303
ChainResidue
BASP93
BTYR94
BLEU145
BGLU168
BEDO302
BHOH405
BHOH415

site_idAC5
Number of Residues12
DetailsBINDING SITE FOR RESIDUE GOL B 304
ChainResidue
ALYS52
AASP99
ASER149
AASP150
AHOH529
BLYS52
BASP99
BALA100
BSER149
BASP150
BHOH509
BHOH510

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PDB entries from 2024-07-17

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