4KI8
Crystal structure of a GroEL-ADP complex in the relaxed allosteric state
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0006457 | biological_process | protein folding |
A | 0009408 | biological_process | response to heat |
A | 0016853 | molecular_function | isomerase activity |
A | 0042026 | biological_process | protein refolding |
A | 0046872 | molecular_function | metal ion binding |
A | 0051082 | molecular_function | unfolded protein binding |
A | 0051085 | biological_process | chaperone cofactor-dependent protein refolding |
A | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
A | 1990220 | cellular_component | GroEL-GroES complex |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0006457 | biological_process | protein folding |
B | 0009408 | biological_process | response to heat |
B | 0016853 | molecular_function | isomerase activity |
B | 0042026 | biological_process | protein refolding |
B | 0046872 | molecular_function | metal ion binding |
B | 0051082 | molecular_function | unfolded protein binding |
B | 0051085 | biological_process | chaperone cofactor-dependent protein refolding |
B | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
B | 1990220 | cellular_component | GroEL-GroES complex |
C | 0005524 | molecular_function | ATP binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0006457 | biological_process | protein folding |
C | 0009408 | biological_process | response to heat |
C | 0016853 | molecular_function | isomerase activity |
C | 0042026 | biological_process | protein refolding |
C | 0046872 | molecular_function | metal ion binding |
C | 0051082 | molecular_function | unfolded protein binding |
C | 0051085 | biological_process | chaperone cofactor-dependent protein refolding |
C | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
C | 1990220 | cellular_component | GroEL-GroES complex |
D | 0005524 | molecular_function | ATP binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0006457 | biological_process | protein folding |
D | 0009408 | biological_process | response to heat |
D | 0016853 | molecular_function | isomerase activity |
D | 0042026 | biological_process | protein refolding |
D | 0046872 | molecular_function | metal ion binding |
D | 0051082 | molecular_function | unfolded protein binding |
D | 0051085 | biological_process | chaperone cofactor-dependent protein refolding |
D | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
D | 1990220 | cellular_component | GroEL-GroES complex |
E | 0005524 | molecular_function | ATP binding |
E | 0005737 | cellular_component | cytoplasm |
E | 0006457 | biological_process | protein folding |
E | 0009408 | biological_process | response to heat |
E | 0016853 | molecular_function | isomerase activity |
E | 0042026 | biological_process | protein refolding |
E | 0046872 | molecular_function | metal ion binding |
E | 0051082 | molecular_function | unfolded protein binding |
E | 0051085 | biological_process | chaperone cofactor-dependent protein refolding |
E | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
E | 1990220 | cellular_component | GroEL-GroES complex |
F | 0005524 | molecular_function | ATP binding |
F | 0005737 | cellular_component | cytoplasm |
F | 0006457 | biological_process | protein folding |
F | 0009408 | biological_process | response to heat |
F | 0016853 | molecular_function | isomerase activity |
F | 0042026 | biological_process | protein refolding |
F | 0046872 | molecular_function | metal ion binding |
F | 0051082 | molecular_function | unfolded protein binding |
F | 0051085 | biological_process | chaperone cofactor-dependent protein refolding |
F | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
F | 1990220 | cellular_component | GroEL-GroES complex |
G | 0005524 | molecular_function | ATP binding |
G | 0005737 | cellular_component | cytoplasm |
G | 0006457 | biological_process | protein folding |
G | 0009408 | biological_process | response to heat |
G | 0016853 | molecular_function | isomerase activity |
G | 0042026 | biological_process | protein refolding |
G | 0046872 | molecular_function | metal ion binding |
G | 0051082 | molecular_function | unfolded protein binding |
G | 0051085 | biological_process | chaperone cofactor-dependent protein refolding |
G | 0140662 | molecular_function | ATP-dependent protein folding chaperone |
G | 1990220 | cellular_component | GroEL-GroES complex |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 23 |
Details | BINDING SITE FOR RESIDUE ADP A 601 |
Chain | Residue |
A | THR30 |
A | GLY415 |
A | TYR478 |
A | ASN479 |
A | ALA480 |
A | ILE493 |
A | ASP495 |
A | MG602 |
A | K603 |
A | HOH710 |
A | HOH711 |
A | LEU31 |
A | HOH716 |
A | HOH728 |
A | HOH750 |
A | HOH768 |
A | GLY32 |
A | ASP87 |
A | GLY88 |
A | THR89 |
A | THR90 |
A | THR91 |
A | GLY414 |
site_id | AC2 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG A 602 |
Chain | Residue |
A | ASP87 |
A | ADP601 |
A | HOH710 |
A | HOH716 |
A | HOH750 |
site_id | AC3 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE K A 603 |
Chain | Residue |
A | THR30 |
A | LYS51 |
A | ADP601 |
A | HOH720 |
A | HOH742 |
A | HOH768 |
A | HOH770 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MPD A 604 |
Chain | Residue |
A | GLU191 |
A | GLN343 |
A | ALA373 |
A | HOH778 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MPD A 605 |
Chain | Residue |
A | ASN10 |
A | VAL14 |
A | LEU17 |
A | LEU104 |
A | ALA108 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MPD A 606 |
Chain | Residue |
A | GLU518 |
G | LEU456 |
G | ASN457 |
site_id | AC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MPD A 607 |
Chain | Residue |
A | GLN505 |
A | HOH789 |
site_id | AC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MPD A 608 |
Chain | Residue |
A | ARG36 |
A | GLN453 |
A | LEU456 |
A | ASN457 |
B | GLU518 |
site_id | AC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MPD A 609 |
Chain | Residue |
A | ALA84 |
A | ALA85 |
A | GLY86 |
A | HIS401 |
A | ARG404 |
A | GLU408 |
A | LYS498 |
site_id | BC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA A 610 |
Chain | Residue |
A | LYS42 |
A | SER43 |
B | HOH750 |
B | HOH756 |
site_id | BC2 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE CA A 611 |
Chain | Residue |
A | ARG445 |
site_id | BC3 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE ADP B 601 |
Chain | Residue |
B | THR30 |
B | LEU31 |
B | GLY32 |
B | PRO33 |
B | ASP87 |
B | GLY88 |
B | THR89 |
B | THR90 |
B | THR91 |
B | GLY414 |
B | GLY415 |
B | TYR478 |
B | ASN479 |
B | ALA480 |
B | ALA481 |
B | ILE493 |
B | ASP495 |
B | MG602 |
B | K603 |
B | HOH711 |
B | HOH733 |
B | HOH753 |
B | HOH758 |
B | HOH761 |
site_id | BC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG B 602 |
Chain | Residue |
B | ASP87 |
B | ADP601 |
B | HOH753 |
B | HOH757 |
B | HOH758 |
site_id | BC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE K B 603 |
Chain | Residue |
B | HOH783 |
B | HOH784 |
B | THR30 |
B | LYS51 |
B | ADP601 |
B | HOH782 |
site_id | BC6 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MPD B 604 |
Chain | Residue |
B | VAL14 |
B | LEU104 |
B | LYS105 |
B | ALA108 |
B | HOH776 |
site_id | BC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MPD B 605 |
Chain | Residue |
B | ARG36 |
B | LEU456 |
B | ASN457 |
B | HOH787 |
C | GLU518 |
site_id | BC8 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MPD B 607 |
Chain | Residue |
B | GLU102 |
B | ARG445 |
site_id | BC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MPD B 608 |
Chain | Residue |
B | ALA83 |
B | ALA84 |
B | GLY86 |
B | HIS401 |
B | GLU408 |
B | LYS498 |
site_id | CC1 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA B 609 |
Chain | Residue |
B | GLU460 |
B | HOH778 |
B | HOH790 |
C | HOH771 |
site_id | CC2 |
Number of Residues | 26 |
Details | BINDING SITE FOR RESIDUE ADP C 601 |
Chain | Residue |
C | THR30 |
C | LEU31 |
C | GLY32 |
C | PRO33 |
C | ASP87 |
C | GLY88 |
C | THR89 |
C | THR90 |
C | THR91 |
C | GLY414 |
C | GLY415 |
C | TYR478 |
C | ASN479 |
C | ALA480 |
C | ALA481 |
C | ILE493 |
C | ASP495 |
C | MG602 |
C | K603 |
C | HOH721 |
C | HOH722 |
C | HOH736 |
C | HOH737 |
C | HOH743 |
C | HOH766 |
C | HOH781 |
site_id | CC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG C 602 |
Chain | Residue |
C | ASP87 |
C | ADP601 |
C | HOH736 |
C | HOH741 |
C | HOH749 |
C | HOH781 |
site_id | CC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE K C 603 |
Chain | Residue |
C | THR30 |
C | GLY32 |
C | LYS51 |
C | ADP601 |
C | HOH721 |
C | HOH766 |
site_id | CC5 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MPD C 604 |
Chain | Residue |
C | VAL14 |
C | LEU104 |
C | ALA108 |
C | HOH775 |
site_id | CC6 |
Number of Residues | 26 |
Details | BINDING SITE FOR RESIDUE ADP D 601 |
Chain | Residue |
D | THR30 |
D | LEU31 |
D | GLY32 |
D | PRO33 |
D | ASP87 |
D | GLY88 |
D | THR89 |
D | THR90 |
D | THR91 |
D | ILE150 |
D | GLY414 |
D | GLY415 |
D | TYR478 |
D | ASN479 |
D | ALA480 |
D | ALA481 |
D | ILE493 |
D | ASP495 |
D | MG602 |
D | K603 |
D | HOH709 |
D | HOH738 |
D | HOH756 |
D | HOH757 |
D | HOH766 |
D | HOH784 |
site_id | CC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG D 602 |
Chain | Residue |
D | ASP87 |
D | ADP601 |
D | HOH709 |
D | HOH738 |
D | HOH756 |
site_id | CC8 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE K D 603 |
Chain | Residue |
D | THR30 |
D | LYS51 |
D | ASN153 |
D | ADP601 |
D | HOH766 |
D | HOH767 |
D | HOH768 |
D | HOH783 |
site_id | CC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MPD D 604 |
Chain | Residue |
D | ASN10 |
D | VAL14 |
D | LEU17 |
D | LEU104 |
D | LYS105 |
D | HOH770 |
site_id | DC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MPD D 605 |
Chain | Residue |
D | ILE175 |
D | THR176 |
site_id | DC2 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MPD D 606 |
Chain | Residue |
D | ASP25 |
site_id | DC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE CA D 607 |
Chain | Residue |
C | HOH742 |
C | HOH756 |
C | HOH774 |
C | HOH784 |
D | HOH713 |
site_id | DC4 |
Number of Residues | 25 |
Details | BINDING SITE FOR RESIDUE ADP E 601 |
Chain | Residue |
E | THR30 |
E | LEU31 |
E | GLY32 |
E | PRO33 |
E | ASP87 |
E | GLY88 |
E | THR89 |
E | THR90 |
E | THR91 |
E | GLY414 |
E | GLY415 |
E | TYR478 |
E | ASN479 |
E | ALA480 |
E | ALA481 |
E | ILE493 |
E | ASP495 |
E | MG602 |
E | K603 |
E | HOH714 |
E | HOH720 |
E | HOH731 |
E | HOH737 |
E | HOH738 |
E | HOH747 |
site_id | DC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG E 602 |
Chain | Residue |
E | ASP87 |
E | ADP601 |
E | HOH731 |
E | HOH737 |
E | HOH738 |
site_id | DC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE K E 603 |
Chain | Residue |
E | THR30 |
E | GLY32 |
E | ADP601 |
E | HOH712 |
E | HOH713 |
E | HOH714 |
site_id | DC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MPD E 604 |
Chain | Residue |
E | GLU102 |
E | ARG445 |
site_id | DC8 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CA E 605 |
Chain | Residue |
D | HOH778 |
E | LYS65 |
E | HOH735 |
site_id | DC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CA E 606 |
Chain | Residue |
E | SER43 |
E | HOH727 |
E | HOH761 |
site_id | EC1 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE CA E 607 |
Chain | Residue |
E | HOH756 |
site_id | EC2 |
Number of Residues | 26 |
Details | BINDING SITE FOR RESIDUE ADP F 601 |
Chain | Residue |
F | THR30 |
F | LEU31 |
F | GLY32 |
F | PRO33 |
F | ASP87 |
F | GLY88 |
F | THR89 |
F | THR90 |
F | THR91 |
F | ILE150 |
F | ASN153 |
F | GLY414 |
F | GLY415 |
F | TYR478 |
F | ASN479 |
F | ALA480 |
F | ALA481 |
F | ILE493 |
F | ASP495 |
F | MG602 |
F | K603 |
F | HOH706 |
F | HOH707 |
F | HOH723 |
F | HOH737 |
F | HOH754 |
site_id | EC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG F 602 |
Chain | Residue |
F | ASP87 |
F | ADP601 |
F | HOH706 |
F | HOH707 |
F | HOH723 |
site_id | EC4 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE K F 603 |
Chain | Residue |
F | THR30 |
F | LYS51 |
F | ADP601 |
F | HOH743 |
F | HOH744 |
F | HOH745 |
site_id | EC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MPD F 604 |
Chain | Residue |
F | THR176 |
F | VAL324 |
F | THR331 |
site_id | EC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE K F 605 |
Chain | Residue |
F | GLU460 |
F | GLU483 |
F | HOH759 |
site_id | EC7 |
Number of Residues | 26 |
Details | BINDING SITE FOR RESIDUE ADP G 601 |
Chain | Residue |
G | THR30 |
G | LEU31 |
G | GLY32 |
G | PRO33 |
G | ASP87 |
G | GLY88 |
G | THR89 |
G | THR90 |
G | THR91 |
G | GLY414 |
G | GLY415 |
G | TYR478 |
G | ASN479 |
G | ALA480 |
G | ALA481 |
G | ILE493 |
G | ASP495 |
G | MG602 |
G | K603 |
G | HOH706 |
G | HOH712 |
G | HOH729 |
G | HOH733 |
G | HOH761 |
G | HOH762 |
G | HOH779 |
site_id | EC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG G 602 |
Chain | Residue |
G | ASP87 |
G | ADP601 |
G | HOH706 |
G | HOH729 |
G | HOH733 |
site_id | EC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE K G 603 |
Chain | Residue |
G | THR30 |
G | LYS51 |
G | ADP601 |
G | HOH762 |
G | HOH763 |
G | HOH765 |
G | HOH766 |
site_id | FC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MPD G 604 |
Chain | Residue |
G | LEU17 |
G | LEU104 |
G | LYS105 |
G | ALA108 |
G | HOH736 |
G | HOH748 |
site_id | FC2 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MPD G 605 |
Chain | Residue |
G | TYR506 |
site_id | FC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE CA G 606 |
Chain | Residue |
A | HOH714 |
G | SER43 |
site_id | FC4 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE CA G 607 |
Chain | Residue |
G | ARG445 |
site_id | FC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE K G 608 |
Chain | Residue |
G | GLU460 |
G | GLU483 |
site_id | FC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CA G 609 |
Chain | Residue |
A | PRO113 |
A | HOH734 |
G | ARG36 |
G | HOH725 |
Functional Information from PROSITE/UniProt