4K50
Rhinovirus 16 polymerase elongation complex (r1_form)
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003723 | molecular_function | RNA binding |
| A | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| A | 0006351 | biological_process | DNA-templated transcription |
| A | 0039694 | biological_process | viral RNA genome replication |
| E | 0003723 | molecular_function | RNA binding |
| E | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| E | 0006351 | biological_process | DNA-templated transcription |
| E | 0039694 | biological_process | viral RNA genome replication |
| I | 0003723 | molecular_function | RNA binding |
| I | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| I | 0006351 | biological_process | DNA-templated transcription |
| I | 0039694 | biological_process | viral RNA genome replication |
| M | 0003723 | molecular_function | RNA binding |
| M | 0003968 | molecular_function | RNA-directed RNA polymerase activity |
| M | 0006351 | biological_process | DNA-templated transcription |
| M | 0039694 | biological_process | viral RNA genome replication |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL A 501 |
| Chain | Residue |
| A | MET154 |
| A | SER179 |
| A | ASP183 |
| A | PHE187 |
| A | CYS289 |
| A | SER290 |
| A | HOH614 |
| A | HOH663 |
| site_id | AC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE ACT A 502 |
| Chain | Residue |
| A | LYS164 |
| A | ARG163 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ACT A 503 |
| Chain | Residue |
| A | LYS336 |
| A | ASP338 |
| A | MET339 |
| A | PHE362 |
| A | HOH694 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 A 504 |
| Chain | Residue |
| A | LYS405 |
| A | PRO406 |
| A | SER407 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE ACT A 505 |
| Chain | Residue |
| A | CYS68 |
| A | SER69 |
| A | ASN71 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ACT A 506 |
| Chain | Residue |
| A | GLY124 |
| A | LYS126 |
| A | HOH635 |
| B | G599 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE ACT B 701 |
| Chain | Residue |
| A | HIS199 |
| A | GLY291 |
| A | ILE294 |
| A | HOH684 |
| A | HOH685 |
| B | U601 |
| B | C602 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE ACT B 702 |
| Chain | Residue |
| B | G600 |
| C | A701 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ACT E 501 |
| Chain | Residue |
| E | CYS212 |
| E | ASP213 |
| E | THR216 |
| E | PHE217 |
| E | LYS220 |
| site_id | BC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE ACT E 502 |
| Chain | Residue |
| E | ARG163 |
| E | LYS164 |
| E | LYS167 |
| site_id | BC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ACT E 503 |
| Chain | Residue |
| E | MET154 |
| E | SER179 |
| E | CYS289 |
| E | SER290 |
| site_id | BC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ACT E 504 |
| Chain | Residue |
| E | VAL121 |
| E | GLY124 |
| E | LYS126 |
| F | C597 |
| site_id | BC4 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE ACT F 701 |
| Chain | Residue |
| E | PHE195 |
| E | HIS199 |
| E | GLY291 |
| E | ILE294 |
| E | HOH654 |
| E | HOH655 |
| F | U601 |
| F | C602 |
| F | HOH810 |
| site_id | BC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE ACT F 702 |
| Chain | Residue |
| E | ARG174 |
| F | G600 |
| site_id | BC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ACT I 501 |
| Chain | Residue |
| I | LYS336 |
| I | LEU337 |
| I | ASP338 |
| I | MET339 |
| I | PHE362 |
| site_id | BC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL I 502 |
| Chain | Residue |
| I | VAL12 |
| I | LYS271 |
| I | TYR278 |
| site_id | BC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ACT I 503 |
| Chain | Residue |
| E | VAL438 |
| E | SER439 |
| E | ARG442 |
| I | HIS8 |
| site_id | BC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ACT I 504 |
| Chain | Residue |
| I | VAL121 |
| I | LYS126 |
| I | HOH630 |
| J | G599 |
| site_id | CC1 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL I 505 |
| Chain | Residue |
| I | MET154 |
| I | SER179 |
| I | ASP183 |
| I | PHE187 |
| I | CYS289 |
| I | SER290 |
| I | HOH609 |
| I | HOH610 |
| site_id | CC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ACT I 506 |
| Chain | Residue |
| I | ARG163 |
| I | LYS164 |
| I | LYS167 |
| I | HOH636 |
| I | HOH642 |
| site_id | CC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE ACT I 507 |
| Chain | Residue |
| I | LYS405 |
| I | PRO406 |
| I | SER407 |
| site_id | CC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE ACT J 701 |
| Chain | Residue |
| J | HOH806 |
| I | PHE195 |
| I | HIS199 |
| I | GLY291 |
| I | ILE294 |
| J | U601 |
| J | C602 |
| site_id | CC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE ACT K 801 |
| Chain | Residue |
| J | G600 |
| K | A701 |
| site_id | CC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE ACT M 501 |
| Chain | Residue |
| M | MET154 |
| M | SER179 |
| M | CYS289 |
| M | SER290 |
| site_id | CC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ACT M 502 |
| Chain | Residue |
| M | CYS212 |
| M | ASP213 |
| M | THR216 |
| M | PHE217 |
| M | LYS220 |
| site_id | CC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE ACT M 503 |
| Chain | Residue |
| M | HIS199 |
| M | GLY291 |
| M | ILE294 |
| N | U601 |
| N | C602 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 452 |
| Details | Domain: {"description":"RdRp catalytic","evidences":[{"source":"PROSITE-ProRule","id":"PRU00539","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 8 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P03300","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
