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4JXJ

Crystal Structure of Ribosomal RNA small subunit methyltransferase A from Rickettsia bellii Determined by Iodide SAD Phasing

Functional Information from GO Data
ChainGOidnamespacecontents
A0000154biological_processrRNA modification
A0000179molecular_functionrRNA (adenine-N6,N6-)-dimethyltransferase activity
A0003723molecular_functionRNA binding
A0005737cellular_componentcytoplasm
A0006364biological_processrRNA processing
A0008168molecular_functionmethyltransferase activity
A0016433molecular_functionrRNA (adenine) methyltransferase activity
A0016740molecular_functiontransferase activity
A0031167biological_processrRNA methylation
A0032259biological_processmethylation
A0052908molecular_function16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 301
ChainResidue
AARG36
ASER248
AHOH485

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 302
ChainResidue
AILE84

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IOD A 303
ChainResidue
AASN45
ALYS110
ATHR112

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 305
ChainResidue
AARG162

site_idAC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 306
ChainResidue
AARG162

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD A 309
ChainResidue
APRO204
AHOH442

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 310
ChainResidue
ALEU214

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IOD A 311
ChainResidue
AARG223
AHOH450

site_idAC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE IOD A 312
ChainResidue
AASN255

Functional Information from PROSITE/UniProt
site_idPS01131
Number of Residues29
DetailsRRNA_A_DIMETH Ribosomal RNA adenine dimethylases signature. VLEiGPGtGgLTrsiLhknpkl..LtVIEtD
ChainResidueDetails
AVAL46-ASP74

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00607","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246905

PDB entries from 2025-12-31

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