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4JP5

X-ray structure of uridine phosphorylase from Yersinia pseudotuberculosis in unliganded state at 2.27 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004850molecular_functionuridine phosphorylase activity
A0005737cellular_componentcytoplasm
A0009116biological_processnucleoside metabolic process
A0009164biological_processnucleoside catabolic process
A0009166biological_processnucleotide catabolic process
A0016757molecular_functionglycosyltransferase activity
A0016763molecular_functionpentosyltransferase activity
A0044206biological_processUMP salvage
B0003824molecular_functioncatalytic activity
B0004850molecular_functionuridine phosphorylase activity
B0005737cellular_componentcytoplasm
B0009116biological_processnucleoside metabolic process
B0009164biological_processnucleoside catabolic process
B0009166biological_processnucleotide catabolic process
B0016757molecular_functionglycosyltransferase activity
B0016763molecular_functionpentosyltransferase activity
B0044206biological_processUMP salvage
C0003824molecular_functioncatalytic activity
C0004850molecular_functionuridine phosphorylase activity
C0005737cellular_componentcytoplasm
C0009116biological_processnucleoside metabolic process
C0009164biological_processnucleoside catabolic process
C0009166biological_processnucleotide catabolic process
C0016757molecular_functionglycosyltransferase activity
C0016763molecular_functionpentosyltransferase activity
C0044206biological_processUMP salvage
D0003824molecular_functioncatalytic activity
D0004850molecular_functionuridine phosphorylase activity
D0005737cellular_componentcytoplasm
D0009116biological_processnucleoside metabolic process
D0009164biological_processnucleoside catabolic process
D0009166biological_processnucleotide catabolic process
D0016757molecular_functionglycosyltransferase activity
D0016763molecular_functionpentosyltransferase activity
D0044206biological_processUMP salvage
E0003824molecular_functioncatalytic activity
E0004850molecular_functionuridine phosphorylase activity
E0005737cellular_componentcytoplasm
E0009116biological_processnucleoside metabolic process
E0009164biological_processnucleoside catabolic process
E0009166biological_processnucleotide catabolic process
E0016757molecular_functionglycosyltransferase activity
E0016763molecular_functionpentosyltransferase activity
E0044206biological_processUMP salvage
F0003824molecular_functioncatalytic activity
F0004850molecular_functionuridine phosphorylase activity
F0005737cellular_componentcytoplasm
F0009116biological_processnucleoside metabolic process
F0009164biological_processnucleoside catabolic process
F0009166biological_processnucleotide catabolic process
F0016757molecular_functionglycosyltransferase activity
F0016763molecular_functionpentosyltransferase activity
F0044206biological_processUMP salvage
Functional Information from PDB Data
site_idAC1
Number of Residues12
DetailsBINDING SITE FOR RESIDUE EDO A 301
ChainResidue
AALA113
BPHE128
BPRO129
BHOH356
AARG115
AMET126
AGLU127
APHE128
APRO129
AALA130
BMET126
BGLU127

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 C 301
ChainResidue
CGLN17
CGLU167
CGLY182
CGLU185
CHOH426

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL E 301
ChainResidue
AARG48
EARG48

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL E 302
ChainResidue
EASN103
EGLN225
EGLU227
EHOH464
EHOH475

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO F 301
ChainResidue
EGLU127
FLEU116
FHIS179
FPHE180

Functional Information from PROSITE/UniProt
site_idPS01232
Number of Residues16
DetailsPNP_UDP_1 Purine and other phosphorylases family 1 signature. StGIGgPStSIaveEL
ChainResidueDetails
ASER66-LEU81

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PDB entries from 2024-07-24

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