4JMX
Structure of LD transpeptidase LdtMt1 in complex with imipenem
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005576 | cellular_component | extracellular region |
| A | 0008360 | biological_process | regulation of cell shape |
| A | 0009252 | biological_process | peptidoglycan biosynthetic process |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016746 | molecular_function | acyltransferase activity |
| A | 0018104 | biological_process | peptidoglycan-protein cross-linking |
| A | 0042597 | cellular_component | periplasmic space |
| A | 0071555 | biological_process | cell wall organization |
| A | 0071972 | molecular_function | peptidoglycan L,D-transpeptidase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE IM2 A 301 |
| Chain | Residue |
| A | MET175 |
| A | ASN228 |
| A | HOH474 |
| A | TYR190 |
| A | GLY204 |
| A | HIS208 |
| A | TRP212 |
| A | SER223 |
| A | HIS224 |
| A | GLY225 |
| A | CYS226 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | ACT_SITE: Proton donor/acceptor => ECO:0000255|PROSITE-ProRule:PRU01373, ECO:0000305|PubMed:23999293 |
| Chain | Residue | Details |
| A | HIS208 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 1 |
| Details | ACT_SITE: Nucleophile => ECO:0000255|PROSITE-ProRule:PRU01373, ECO:0000269|PubMed:23999293 |
| Chain | Residue | Details |
| A | CYS226 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 3 |
| Details | BINDING: BINDING => ECO:0000250 |
| Chain | Residue | Details |
| A | TYR190 | |
| A | SER203 | |
| A | ASN228 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | BINDING: BINDING => ECO:0000269|Ref.2, ECO:0007744|PDB:4JMX |
| Chain | Residue | Details |
| A | HIS208 | |
| A | HIS224 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | BINDING: covalent => ECO:0000269|Ref.2, ECO:0007744|PDB:4JMX |
| Chain | Residue | Details |
| A | CYS226 |
