Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4JK5

Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Ser)

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 301
ChainResidue
ALYS62
AASN87
ALEU88
AGLN170
APRO170
AHIS170
AHOH433

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 302
ChainResidue
AARG116
AHOH464
APHE21
ASER115

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 303
ChainResidue
ASER75
AASN76
AARG206
AHOH438
AHOH472

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 304
ChainResidue
AARG35
AHIS37
AARG37
BARG4

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 305
ChainResidue
ALEU90
ALYS92
ATRP237

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 306
ChainResidue
AGLY37
ASER37

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE P6G A 307
ChainResidue
AASN74
AGLU137
ASER202

site_idAC8
Number of Residues33
DetailsBINDING SITE FOR CHAIN B OF BICYCLIC PEPTIDE UK18-D-SER, UPA INHIBITOR
ChainResidue
AHIS37
ASER37
ATYR40
AVAL41
ACYS42
AHIS57
AASP60
ATYR60
AHIS99
ATYR127
ATYR151
AARG166
ATHR178
AASP189
ASER190
AGLN192
AGLY193
ASER195
AGLY216
AGLY218
ACYS220
AGLY226
ASO4304
AHOH417
AHOH421
AHOH459
AHOH469
AHOH481
AHOH490
BHOH201
BHOH202
BHOH203
BHOH205

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. ISATHC
ChainResidueDetails
AILE53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DScqGDSGGPLV
ChainResidueDetails
AASP189-VAL200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system
ChainResidueDetails
AHIS57
AASP102
ASER195

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:9151681
ChainResidueDetails
ASER146

site_idSWS_FT_FI3
Number of Residues1
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine
ChainResidueDetails
AGLN145

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon