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4JCD

S268Y Variant of JC Polyomavirus Major Capsid Protein VP1

Functional Information from GO Data
ChainGOidnamespacecontents
A0005198molecular_functionstructural molecule activity
A0019028cellular_componentviral capsid
B0005198molecular_functionstructural molecule activity
B0019028cellular_componentviral capsid
C0005198molecular_functionstructural molecule activity
C0019028cellular_componentviral capsid
D0005198molecular_functionstructural molecule activity
D0019028cellular_componentviral capsid
E0005198molecular_functionstructural molecule activity
E0019028cellular_componentviral capsid
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 301
ChainResidue
ASER62
ASER64
ASER69
AASP70
ASER71
APRO72
AHOH515
EHIS121

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 302
ChainResidue
AGLY214
ATHR215
AHOH561
AHIS142

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL B 301
ChainResidue
AHIS121
BSER62
BSER64
BSER69
BASP70
BSER71
BMET76

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL C 301
ChainResidue
BHIS121
CSER62
CSER64
CSER69
CASP70
CSER71
CPRO72
CHOH543

site_idAC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL D 301
ChainResidue
CHIS121
DSER62
DSER64
DASP70
DSER71
DPRO72
DHOH558

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO D 302
ChainResidue
DHIS142
DGLY214
DTHR215
DHOH448

site_idAC7
Number of Residues12
DetailsBINDING SITE FOR RESIDUE GOL E 301
ChainResidue
AARG265
AHOH600
BASP65
BTHR66
DHIS121
ESER62
ESER64
ESER69
EASP70
ESER71
EPRO72
EHOH491

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO E 302
ChainResidue
EHIS142
EGLY214
ETHR215
EHOH417

Functional Information from PROSITE/UniProt
site_idPS00178
Number of Residues12
DetailsAA_TRNA_LIGASE_I Aminoacyl-transfer RNA synthetases class-I signature. PnlNEdLTCGNI
ChainResidueDetails
APRO88-ILE99

222415

PDB entries from 2024-07-10

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