4J0Q
Crystal structure of Pseudomonas putida elongation factor Tu (EF-Tu)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003746 | molecular_function | translation elongation factor activity |
A | 0003924 | molecular_function | GTPase activity |
A | 0005525 | molecular_function | GTP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0006412 | biological_process | translation |
A | 0006414 | biological_process | translational elongation |
A | 0097216 | molecular_function | guanosine tetraphosphate binding |
B | 0003746 | molecular_function | translation elongation factor activity |
B | 0003924 | molecular_function | GTPase activity |
B | 0005525 | molecular_function | GTP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0006412 | biological_process | translation |
B | 0006414 | biological_process | translational elongation |
B | 0097216 | molecular_function | guanosine tetraphosphate binding |
C | 0003746 | molecular_function | translation elongation factor activity |
C | 0003924 | molecular_function | GTPase activity |
C | 0005525 | molecular_function | GTP binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0006412 | biological_process | translation |
C | 0006414 | biological_process | translational elongation |
C | 0097216 | molecular_function | guanosine tetraphosphate binding |
D | 0003746 | molecular_function | translation elongation factor activity |
D | 0003924 | molecular_function | GTPase activity |
D | 0005525 | molecular_function | GTP binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0006412 | biological_process | translation |
D | 0006414 | biological_process | translational elongation |
D | 0097216 | molecular_function | guanosine tetraphosphate binding |
E | 0003746 | molecular_function | translation elongation factor activity |
E | 0003924 | molecular_function | GTPase activity |
E | 0005525 | molecular_function | GTP binding |
E | 0005737 | cellular_component | cytoplasm |
E | 0005829 | cellular_component | cytosol |
E | 0006412 | biological_process | translation |
E | 0006414 | biological_process | translational elongation |
E | 0097216 | molecular_function | guanosine tetraphosphate binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG A 401 |
Chain | Residue |
A | THR26 |
A | GDP402 |
A | HOH513 |
A | HOH541 |
A | HOH542 |
A | HOH543 |
site_id | AC2 |
Number of Residues | 22 |
Details | BINDING SITE FOR RESIDUE GDP A 402 |
Chain | Residue |
A | LYS25 |
A | THR26 |
A | THR27 |
A | ASN136 |
A | LYS137 |
A | ASP139 |
A | LEU140 |
A | SER174 |
A | ALA175 |
A | ARG176 |
A | MG401 |
A | HOH513 |
A | HOH516 |
A | HOH520 |
A | HOH528 |
A | HOH541 |
A | HOH542 |
A | HOH575 |
C | HOH585 |
A | ASP22 |
A | HIS23 |
A | GLY24 |
site_id | AC3 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE MES A 403 |
Chain | Residue |
A | ARG176 |
A | MET177 |
A | LYS182 |
A | ASP184 |
A | HOH549 |
C | ARG176 |
C | LYS182 |
C | ASP184 |
C | HOH548 |
site_id | AC4 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MPD A 404 |
Chain | Residue |
A | GLY279 |
C | ASP110 |
C | MET113 |
site_id | AC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MPD A 405 |
Chain | Residue |
A | ASP110 |
A | HOH579 |
B | MET264 |
B | PHE265 |
B | CYS278 |
site_id | AC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG B 401 |
Chain | Residue |
B | THR26 |
B | GDP402 |
B | HOH511 |
B | HOH537 |
B | HOH538 |
B | HOH539 |
site_id | AC7 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE GDP B 402 |
Chain | Residue |
B | ASP22 |
B | HIS23 |
B | GLY24 |
B | LYS25 |
B | THR26 |
B | THR27 |
B | ASN136 |
B | LYS137 |
B | ASP139 |
B | LEU140 |
B | SER174 |
B | ALA175 |
B | ARG176 |
B | MG401 |
B | HOH511 |
B | HOH517 |
B | HOH518 |
B | HOH529 |
B | HOH538 |
B | HOH539 |
site_id | AC8 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE MES B 403 |
Chain | Residue |
B | ARG176 |
B | MET177 |
B | LYS182 |
B | ASP184 |
B | HOH501 |
D | ARG176 |
D | LYS182 |
D | ASP184 |
D | HOH505 |
site_id | AC9 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG C 401 |
Chain | Residue |
C | THR26 |
C | GDP402 |
C | HOH502 |
C | HOH508 |
C | HOH541 |
C | HOH549 |
site_id | BC1 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE GDP C 402 |
Chain | Residue |
C | MG401 |
C | HOH502 |
C | HOH516 |
C | HOH521 |
C | HOH541 |
C | HOH549 |
C | HOH566 |
C | HOH580 |
C | ASP22 |
C | HIS23 |
C | GLY24 |
C | LYS25 |
C | THR26 |
C | THR27 |
C | ASN136 |
C | LYS137 |
C | ASP139 |
C | LEU140 |
C | SER174 |
C | ALA175 |
C | ARG176 |
site_id | BC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MPD C 403 |
Chain | Residue |
C | THR232 |
C | GLU263 |
C | PHE265 |
D | ASP110 |
site_id | BC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG D 401 |
Chain | Residue |
D | THR26 |
D | GDP402 |
D | HOH501 |
D | HOH502 |
D | HOH524 |
D | HOH525 |
site_id | BC4 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE GDP D 402 |
Chain | Residue |
B | HOH516 |
D | ASP22 |
D | HIS23 |
D | GLY24 |
D | LYS25 |
D | THR26 |
D | THR27 |
D | ASN136 |
D | LYS137 |
D | ASP139 |
D | LEU140 |
D | SER174 |
D | ALA175 |
D | ARG176 |
D | MG401 |
D | HOH502 |
D | HOH510 |
D | HOH524 |
D | HOH529 |
D | HOH534 |
D | HOH556 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MPD D 403 |
Chain | Residue |
D | THR232 |
D | GLU263 |
D | ASN277 |
D | CYS278 |
E | ASP110 |
site_id | BC6 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG E 401 |
Chain | Residue |
E | THR26 |
E | GDP402 |
E | HOH501 |
E | HOH509 |
E | HOH510 |
E | HOH511 |
site_id | BC7 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE GDP E 402 |
Chain | Residue |
E | HIS20 |
E | ASP22 |
E | HIS23 |
E | GLY24 |
E | LYS25 |
E | THR26 |
E | THR27 |
E | ASN136 |
E | LYS137 |
E | ASP139 |
E | LEU140 |
E | SER174 |
E | ALA175 |
E | ARG176 |
E | MG401 |
E | HOH501 |
E | HOH509 |
E | HOH511 |
site_id | BC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MES E 403 |
Chain | Residue |
E | ASP139 |
E | ASP139 |
E | ARG176 |
E | ASP184 |
E | ASP184 |
site_id | BC9 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MPD E 404 |
Chain | Residue |
B | ASP110 |
E | THR232 |
Functional Information from PROSITE/UniProt
site_id | PS00301 |
Number of Residues | 16 |
Details | G_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DSapeEKaRGITIntA |
Chain | Residue | Details |
A | ASP51-ALA66 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 15 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00118 |
Chain | Residue | Details |
A | GLY19 | |
D | GLY19 | |
D | ASP81 | |
D | ASN136 | |
E | GLY19 | |
E | ASP81 | |
E | ASN136 | |
A | ASP81 | |
A | ASN136 | |
B | GLY19 | |
B | ASP81 | |
B | ASN136 | |
C | GLY19 | |
C | ASP81 | |
C | ASN136 |