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4IRR

Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0004799molecular_functionthymidylate synthase activity
A0006231biological_processdTMP biosynthetic process
A0006235biological_processdTTP biosynthetic process
A0008168molecular_functionmethyltransferase activity
A0009165biological_processnucleotide biosynthetic process
A0016740molecular_functiontransferase activity
A0016741molecular_functiontransferase activity, transferring one-carbon groups
A0032259biological_processmethylation
B0004799molecular_functionthymidylate synthase activity
B0006231biological_processdTMP biosynthetic process
B0006235biological_processdTTP biosynthetic process
B0008168molecular_functionmethyltransferase activity
B0009165biological_processnucleotide biosynthetic process
B0016740molecular_functiontransferase activity
B0016741molecular_functiontransferase activity, transferring one-carbon groups
B0032259biological_processmethylation
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE UMP A 401
ChainResidue
AARG51
AHIS258
ATYR260
AHOH523
AHOH645
BARG177
BARG178
ACYS197
AGLN216
AARG217
ASER218
AGLY219
AASP220
AGLY224
AASN228

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DTT A 402
ChainResidue
ASER95
AARG142
AHIS143
ASER156
AHOH627

site_idAC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE DTT A 403
ChainResidue
ALYS268

site_idAC4
Number of Residues17
DetailsBINDING SITE FOR RESIDUE UMP B 401
ChainResidue
AARG177
AARG178
BARG51
BCYS197
BGLN216
BARG217
BSER218
BGLY219
BASP220
BGLY224
BVAL225
BASN228
BHIS258
BTYR260
BDTT402
BHOH567
BHOH578

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE DTT B 402
ChainResidue
BGLU89
BPHE227
BUMP401
BHOH570
BHOH622
BHOH658

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE DTT B 403
ChainResidue
ATYR204
ASER211
ATHR249
BTHR46
BSER58
BPHE60
BHOH580

Functional Information from PROSITE/UniProt
site_idPS00091
Number of Residues29
DetailsTHYMIDYLATE_SYNTHASE Thymidylate synthase active site. RriImsaWNpsdlgqmv.....LpPCHtmcQFyV
ChainResidueDetails
AARG177-VAL205

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PDB entries from 2025-06-18

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