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4IR9

Polymerase-DNA complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0000731biological_processDNA synthesis involved in DNA repair
A0003677molecular_functionDNA binding
A0003684molecular_functiondamaged DNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005515molecular_functionprotein binding
A0005737cellular_componentcytoplasm
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0006281biological_processDNA repair
A0006974biological_processDNA damage response
A0008296molecular_function3'-5'-DNA exonuclease activity
A0009432biological_processSOS response
A0042276biological_processerror-prone translesion synthesis
A0046872molecular_functionmetal ion binding
A0070987biological_processerror-free translesion synthesis
F0000287molecular_functionmagnesium ion binding
F0000731biological_processDNA synthesis involved in DNA repair
F0003677molecular_functionDNA binding
F0003684molecular_functiondamaged DNA binding
F0003887molecular_functionDNA-directed DNA polymerase activity
F0005515molecular_functionprotein binding
F0005737cellular_componentcytoplasm
F0006260biological_processDNA replication
F0006261biological_processDNA-templated DNA replication
F0006281biological_processDNA repair
F0006974biological_processDNA damage response
F0008296molecular_function3'-5'-DNA exonuclease activity
F0009432biological_processSOS response
F0042276biological_processerror-prone translesion synthesis
F0046872molecular_functionmetal ion binding
F0070987biological_processerror-free translesion synthesis
Functional Information from PDB Data
site_idAC1
Number of Residues24
DetailsBINDING SITE FOR RESIDUE XG4 F 401
ChainResidue
FASP8
FSER55
FASP103
FLYS157
FMG402
FMG403
FHOH502
FHOH508
FHOH518
FHOH540
FHOH549
FMET9
FHOH556
FHOH557
GDC840
GDG841
HDC873
FASP10
FCYS11
FPHE12
FPHE13
FSER42
FTHR43
FARG49

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG F 402
ChainResidue
FASP8
FMET9
FASP103
FXG4401

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG F 403
ChainResidue
FASP8
FASP103
FGLU104
FXG4401
FHOH518
HDC873

site_idAC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE XG4 A 401
ChainResidue
AASP8
AMET9
AASP10
ACYS11
APHE12
APHE13
ASER42
ATHR43
AARG49
ASER55
AASP103
AGLU104
ALYS157
AMG402
AMG403
BDC840
BDG841
CDC873

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 402
ChainResidue
AASP8
AMET9
AASP103
AXG4401
AMG403

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 403
ChainResidue
AASP8
AASP103
AGLU104
AXG4401
AMG402

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: ACT_SITE => ECO:0000250
ChainResidueDetails
FGLU104
AGLU104

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
FASP8
FASP103
AASP8
AASP103

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Substrate discrimination => ECO:0000250
ChainResidueDetails
FPHE13
APHE13

224201

PDB entries from 2024-08-28

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