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4IJX

Crystal structure of human Ap4A hydrolase E58A mutant complexed with DPO

Functional Information from GO Data
ChainGOidnamespacecontents
A0004081molecular_functionbis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity
A0005515molecular_functionprotein binding
A0005525molecular_functionGTP binding
A0005759cellular_componentmitochondrial matrix
A0006139biological_processnucleobase-containing compound metabolic process
A0006167biological_processAMP biosynthetic process
A0006754biological_processATP biosynthetic process
A0006915biological_processapoptotic process
A0008796molecular_functionbis(5'-nucleosyl)-tetraphosphatase activity
A0008803molecular_functionbis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity
A0016787molecular_functionhydrolase activity
A0034599biological_processcellular response to oxidative stress
B0004081molecular_functionbis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity
B0005515molecular_functionprotein binding
B0005525molecular_functionGTP binding
B0005759cellular_componentmitochondrial matrix
B0006139biological_processnucleobase-containing compound metabolic process
B0006167biological_processAMP biosynthetic process
B0006754biological_processATP biosynthetic process
B0006915biological_processapoptotic process
B0008796molecular_functionbis(5'-nucleosyl)-tetraphosphatase activity
B0008803molecular_functionbis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity
B0016787molecular_functionhydrolase activity
B0034599biological_processcellular response to oxidative stress
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 201
ChainResidue
AASP50
AGLU53
AGLN140
BLYS77
BTRP94

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE DPO A 202
ChainResidue
ALYS42
ATYR82
ALYS89

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 203
ChainResidue
AALA23
AILE24
AGLY118
ALEU119
AHIS139
AHOH337
AASN22

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE PO4 B 201
ChainResidue
AARG12
ATRP116
AHOH311
BTYR114
BTRP116
BHOH304
BHOH307
BHOH312
BHOH352

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PO4 B 202
ChainResidue
BLYS42
BTYR82
BLYS89

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: N-acetylalanine => ECO:0000269|Ref.5
ChainResidueDetails
AALA2
BALA2

222624

PDB entries from 2024-07-17

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