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4HYJ

Crystal structure of Exiguobacterium sibiricum rhodopsin

Functional Information from GO Data
ChainGOidnamespacecontents
A0005216molecular_functionmonoatomic ion channel activity
A0006811biological_processmonoatomic ion transport
A0007602biological_processphototransduction
A0009881molecular_functionphotoreceptor activity
A0010461molecular_functionlight-activated monoatomic ion channel activity
A0016020cellular_componentmembrane
A0034220biological_processmonoatomic ion transmembrane transport
B0005216molecular_functionmonoatomic ion channel activity
B0006811biological_processmonoatomic ion transport
B0007602biological_processphototransduction
B0009881molecular_functionphotoreceptor activity
B0010461molecular_functionlight-activated monoatomic ion channel activity
B0016020cellular_componentmembrane
B0034220biological_processmonoatomic ion transmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE RET A 301
ChainResidue
ATYR83
ATYR194
APRO195
ATYR198
ALYS225
ATRP86
AMET122
AGLY126
ATYR147
AGLY150
ACYS151
ATRP154
ATRP191

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE LFA A 302
ChainResidue
ALFA308

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE LFA A 304
ChainResidue
APRO38
ATHR45
ALEU49
ALFA305
BVAL53
BPHE60
BILE81
BILE84

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE LFA A 305
ChainResidue
AVAL88
ALFA304
BLEU49

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE LFA A 306
ChainResidue
ALYS114
AILE117
APHE152
ATYR156
ALFA312

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE LFA A 307
ChainResidue
APHE186

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE LFA A 308
ChainResidue
AVAL212
ALFA302

site_idAC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE LFA A 310
ChainResidue
ALYS62

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE LFA A 311
ChainResidue
AVAL124
BLFA317

site_idBC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE LFA A 312
ChainResidue
ALFA306

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE LFA A 313
ChainResidue
AILE193
AILE216

site_idBC3
Number of Residues12
DetailsBINDING SITE FOR RESIDUE RET B 301
ChainResidue
BTYR83
BTRP86
BTHR90
BMET122
BGLY126
BTYR147
BGLY150
BCYS151
BTRP191
BTYR194
BASP221
BLYS225

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE LFA B 302
ChainResidue
ALEU92
AVAL95
BGLU80
BILE84

site_idBC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE LFA B 303
ChainResidue
BTHR45

site_idBC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE LFA B 304
ChainResidue
BLYS62

site_idBC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE LFA B 305
ChainResidue
AILE158
APHE162
ATHR163
BLFA319

site_idBC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE LFA B 306
ChainResidue
BLEU27

site_idBC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE LFA B 307
ChainResidue
APHE203
BLFA308
BLFA310

site_idCC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE LFA B 308
ChainResidue
APHE139
APHE203
BLFA307

site_idCC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE LFA B 309
ChainResidue
AGLU80
ATYR127
BVAL95
BLEU103
BARG109

site_idCC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE LFA B 310
ChainResidue
BLEU185
BLFA307

site_idCC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE LFA B 311
ChainResidue
BTHR223

site_idCC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE LFA B 312
ChainResidue
BGLN141
BTRP145

site_idCC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE LFA B 313
ChainResidue
APHE152
BGLN141
BTRP145

site_idCC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE LFA B 314
ChainResidue
BPHE52
BTYR59

site_idCC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE LFA B 315
ChainResidue
BTYR156

site_idCC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE LFA B 316
ChainResidue
APHE234
BTYR13
BLFA318

site_idDC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE LFA B 317
ChainResidue
ALFA311
BILE121

site_idDC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE LFA B 318
ChainResidue
ATYR28
ALEU230
BTRP16
BVAL20
BLFA316

site_idDC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE LFA B 319
ChainResidue
BLFA305

Functional Information from PROSITE/UniProt
site_idPS00950
Number of Residues13
DetailsBACTERIAL_OPSIN_1 Bacterial rhodopsins signature 1. RYiDWlVTTPLLL
ChainResidueDetails
AARG82-LEU94

224201

PDB entries from 2024-08-28

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