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4H8E

Structure of S. aureus undecaprenyl diphosphate synthase in complex with FPP and sulfate

Functional Information from GO Data
ChainGOidnamespacecontents
A0000287molecular_functionmagnesium ion binding
A0004659molecular_functionprenyltransferase activity
A0005829cellular_componentcytosol
A0008834molecular_functionditrans,polycis-undecaprenyl-diphosphate synthase [(2E,6E)-farnesyl-diphosphate specific] activity
A0016094biological_processpolyprenol biosynthetic process
A0016740molecular_functiontransferase activity
A0016765molecular_functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
A0030145molecular_functionmanganese ion binding
A0045547molecular_functionditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 301
ChainResidue
AASP33
AFPP302
AHOH425
AHOH427
AHOH432

site_idAC2
Number of Residues18
DetailsBINDING SITE FOR RESIDUE FPP A 302
ChainResidue
AGLY36
AARG37
AARG46
AHIS50
AALA76
AARG84
ALEU95
APHE99
AMG301
AHOH425
AHOH427
AHOH431
AHOH432
AHOH446
AMET32
AASP33
AGLY34
AASN35

site_idAC3
Number of Residues11
DetailsBINDING SITE FOR RESIDUE SO4 A 303
ChainResidue
AARG201
AARG207
ASER209
AARG249
APHE250
AGLY251
AHOH407
AHOH414
AHOH425
AHOH432
AHOH453

Functional Information from PROSITE/UniProt
site_idPS01066
Number of Residues18
DetailsUPP_SYNTHASE Undecaprenyl pyrophosphate synthase family signature. ELLIRTSGeqRiSnFLIW
ChainResidueDetails
AGLU197-TRP214

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01139","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Proton acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_01139","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues15
DetailsBinding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_01139","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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