Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4H84

Crystal structure of the catalytic domain of Human MMP12 in complex with a selective carboxylate based inhibitor.

Functional Information from GO Data
ChainGOidnamespacecontents
A0004222molecular_functionmetalloendopeptidase activity
A0006508biological_processproteolysis
A0008237molecular_functionmetallopeptidase activity
A0008270molecular_functionzinc ion binding
A0031012cellular_componentextracellular matrix
B0004222molecular_functionmetalloendopeptidase activity
B0006508biological_processproteolysis
B0008237molecular_functionmetallopeptidase activity
B0008270molecular_functionzinc ion binding
B0031012cellular_componentextracellular matrix
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 301
ChainResidue
AHIS218
AHIS222
AHIS228
AY38306

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 302
ChainResidue
AHIS168
AASP170
AHIS183
AHIS196

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 303
ChainResidue
AGLY190
AGLY192
AASP194
AHOH401
AHOH406
AASP158

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA A 304
ChainResidue
AASP124
AGLU199
AGLU201
AHOH402
AHOH471

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 305
ChainResidue
AASP175
AGLY176
AGLY178
AILE180
AASP198
AGLU201

site_idAC6
Number of Residues21
DetailsBINDING SITE FOR RESIDUE Y38 A 306
ChainResidue
AILE180
ALEU181
AALA182
ALEU214
AHIS218
AGLU219
AHIS222
AHIS228
AVAL235
APHE237
APRO238
ATHR239
ATYR240
AZN301
APGO314
BHIS172
BHIS183
BALA184
BPHE185
BHOH423
BHOH477

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PGO A 307
ChainResidue
AASP171
AHIS172
BTHR239
BTYR240
BY38301
BHOH485

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PGR A 308
ChainResidue
ALEU181
AGLY209
ATHR210
ATYR240
AHOH501

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PGO A 309
ChainResidue
AGLY106
APRO107
AARG110

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 310
ChainResidue
APHE163
AALA164
AARG165
ASER189
AHOH419
AHOH427
AHOH430

site_idBC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PGO A 311
ChainResidue
ALYS111
AMET156
AASP158
AALA167
AASP170
AASP171
AHIS172
AALA173
AHOH405
AHOH444
AHOH479

site_idBC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PEG A 312
ChainResidue
AGLY225
AGLY227
AHIS228
AHOH418
AHOH451
AHOH474
BGLY225
BGLY227

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PEG A 313
ChainResidue
AARG110
AHIS112
AASP200
AHOH471
AHOH517

site_idBC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PGO A 314
ChainResidue
AGLY179
ATHR239
ATYR240
AY38306
AHOH467
AHOH475
BASP171
BHIS172

site_idBC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE GOL A 315
ChainResidue
APRO123
AHOH535

site_idBC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 316
ChainResidue
AARG127
AHOH505
BARG135

site_idBC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 317
ChainResidue
ATRP109
AARG110
AHIS168
AGLY169
AGLY188
AHOH425
AHOH438

site_idBC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PEG A 318
ChainResidue
ATYR132
ATHR205
APHE213
AILE245
AHOH404
AHOH468
AHOH472
AHOH500

site_idCC1
Number of Residues21
DetailsBINDING SITE FOR RESIDUE Y38 B 301
ChainResidue
AHIS172
AHIS183
AALA184
APHE185
APGO307
AHOH411
BILE180
BLEU181
BALA182
BLEU214
BHIS218
BGLU219
BHIS222
BHIS228
BVAL235
BPHE237
BPRO238
BTYR240
BZN302
BGOL309
BHOH423

site_idCC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 302
ChainResidue
BHIS218
BHIS222
BHIS228
BY38301

site_idCC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 303
ChainResidue
BHIS168
BASP170
BHIS183
BHIS196

site_idCC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 304
ChainResidue
AARG256
BASP158
BGLY190
BGLY192
BASP194
BHOH403

site_idCC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CA B 305
ChainResidue
BASP124
BGLU199
BGLU201
BHOH402
BHOH415

site_idCC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA B 306
ChainResidue
BASP175
BGLY176
BGLY178
BILE180
BASP198
BGLU201

site_idCC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PGO B 307
ChainResidue
AASP175
BASP175
BLYS177

site_idCC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PGO B 308
ChainResidue
BTYR132
BALA133
BLYS136
BTHR205
BILE245
BHOH406
BHOH413

site_idCC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 309
ChainResidue
BLYS233
BALA234
BTHR239
BLYS241
BY38301
BHOH480

site_idDC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 310
ChainResidue
BVAL108
BTRP109
BARG110
BGLY188
BHOH527

site_idDC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL B 311
ChainResidue
ALYS233
BPRO146
BTYR262

site_idDC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE PGO B 312
ChainResidue
BLYS136
BILE245
BHOH463

Functional Information from PROSITE/UniProt
site_idPS00142
Number of Residues10
DetailsZINC_PROTEASE Neutral zinc metallopeptidases, zinc-binding region signature. TAVHEIGHSL
ChainResidueDetails
ATHR215-LEU224

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
AGLU219
BGLU219

site_idSWS_FT_FI2
Number of Residues38
DetailsBINDING:
ChainResidueDetails
AASP124
AGLY190
AGLY192
AASP194
AHIS196
AASP198
AGLU199
AGLU201
AHIS218
AHIS222
AHIS228
AASP158
BASP124
BASP158
BHIS168
BASP170
BASP175
BGLY176
BGLY178
BILE180
BHIS183
BGLY190
AHIS168
BGLY192
BASP194
BHIS196
BASP198
BGLU199
BGLU201
BHIS218
BHIS222
BHIS228
AASP170
AASP175
AGLY176
AGLY178
AILE180
AHIS183

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon