4GV8
DUTPase from phage phi11 of S.aureus: visualization of the species-specific insert
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000287 | molecular_function | magnesium ion binding |
A | 0004170 | molecular_function | dUTP diphosphatase activity |
A | 0006226 | biological_process | dUMP biosynthetic process |
A | 0016787 | molecular_function | hydrolase activity |
A | 0046081 | biological_process | dUTP catabolic process |
A | 0046872 | molecular_function | metal ion binding |
B | 0000287 | molecular_function | magnesium ion binding |
B | 0004170 | molecular_function | dUTP diphosphatase activity |
B | 0006226 | biological_process | dUMP biosynthetic process |
B | 0016787 | molecular_function | hydrolase activity |
B | 0046081 | biological_process | dUTP catabolic process |
B | 0046872 | molecular_function | metal ion binding |
C | 0000287 | molecular_function | magnesium ion binding |
C | 0004170 | molecular_function | dUTP diphosphatase activity |
C | 0006226 | biological_process | dUMP biosynthetic process |
C | 0016787 | molecular_function | hydrolase activity |
C | 0046081 | biological_process | dUTP catabolic process |
C | 0046872 | molecular_function | metal ion binding |
D | 0000287 | molecular_function | magnesium ion binding |
D | 0004170 | molecular_function | dUTP diphosphatase activity |
D | 0006226 | biological_process | dUMP biosynthetic process |
D | 0016787 | molecular_function | hydrolase activity |
D | 0046081 | biological_process | dUTP catabolic process |
D | 0046872 | molecular_function | metal ion binding |
E | 0000287 | molecular_function | magnesium ion binding |
E | 0004170 | molecular_function | dUTP diphosphatase activity |
E | 0006226 | biological_process | dUMP biosynthetic process |
E | 0016787 | molecular_function | hydrolase activity |
E | 0046081 | biological_process | dUTP catabolic process |
E | 0046872 | molecular_function | metal ion binding |
F | 0000287 | molecular_function | magnesium ion binding |
F | 0004170 | molecular_function | dUTP diphosphatase activity |
F | 0006226 | biological_process | dUMP biosynthetic process |
F | 0016787 | molecular_function | hydrolase activity |
F | 0046081 | biological_process | dUTP catabolic process |
F | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE DUP A 201 |
Chain | Residue |
A | GLY78 |
A | HOH305 |
A | HOH316 |
A | HOH318 |
A | HOH320 |
A | HOH378 |
A | HOH384 |
B | PHE164 |
C | ASN20 |
C | ARG64 |
C | SER65 |
A | LYS79 |
C | GLY66 |
C | GLN136 |
C | HOH354 |
C | HOH355 |
C | HOH356 |
A | ILE80 |
A | ASP81 |
A | TYR84 |
A | LEU88 |
A | GLY89 |
A | MG202 |
A | HOH303 |
site_id | AC2 |
Number of Residues | 22 |
Details | BINDING SITE FOR RESIDUE DUP B 201 |
Chain | Residue |
A | ASN20 |
A | ARG64 |
A | SER65 |
A | GLY66 |
A | GLN136 |
A | HOH308 |
A | HOH310 |
A | HOH343 |
A | HOH346 |
A | HOH364 |
A | HOH365 |
A | HOH366 |
B | GLY78 |
B | LYS79 |
B | ASP81 |
B | TYR84 |
B | ASN87 |
B | LEU88 |
B | GLY89 |
B | MG202 |
B | HOH326 |
C | PHE164 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG A 203 |
Chain | Residue |
A | ASP95 |
A | HOH372 |
B | ASP95 |
B | HOH365 |
C | ASP95 |
C | HOH364 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG B 202 |
Chain | Residue |
A | HOH364 |
A | HOH365 |
A | HOH366 |
B | DUP201 |
site_id | AC5 |
Number of Residues | 25 |
Details | BINDING SITE FOR RESIDUE DUP C 201 |
Chain | Residue |
B | ASN20 |
B | ARG64 |
B | SER65 |
B | GLY66 |
B | GLN136 |
B | HOH304 |
B | HOH305 |
B | HOH315 |
B | HOH339 |
B | HOH360 |
B | HOH361 |
B | HOH363 |
B | HOH368 |
B | HOH372 |
B | HOH373 |
B | HOH377 |
C | GLY78 |
C | LYS79 |
C | ASP81 |
C | TYR84 |
C | ASN87 |
C | LEU88 |
C | GLY89 |
C | MG202 |
C | HOH341 |
site_id | AC6 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG C 202 |
Chain | Residue |
B | HOH360 |
B | HOH361 |
B | HOH363 |
C | DUP201 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE MG A 202 |
Chain | Residue |
A | DUP201 |
C | HOH354 |
C | HOH355 |
C | HOH356 |
site_id | AC8 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE DUP D 201 |
Chain | Residue |
D | HOH320 |
D | HOH327 |
D | HOH328 |
E | PHE164 |
F | ASN20 |
F | ARG64 |
F | SER65 |
F | GLY66 |
F | GLN136 |
D | GLY78 |
D | LYS79 |
D | ASP81 |
D | TYR84 |
D | ASN87 |
D | LEU88 |
D | GLY89 |
D | MG202 |
D | HOH311 |
D | HOH317 |
site_id | AC9 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE DUP E 201 |
Chain | Residue |
D | ARG64 |
D | SER65 |
D | GLY66 |
D | GLN136 |
D | HOH316 |
D | HOH323 |
D | HOH331 |
D | HOH337 |
E | GLY78 |
E | LYS79 |
E | ASP81 |
E | TYR84 |
E | GLY89 |
E | MG202 |
F | PHE164 |
site_id | BC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG D 203 |
Chain | Residue |
D | ASP95 |
D | HOH307 |
E | ASP95 |
E | HOH306 |
F | ASP95 |
F | HOH301 |
site_id | BC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG E 202 |
Chain | Residue |
D | ASP28 |
D | HOH331 |
E | DUP201 |
site_id | BC3 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE DUP F 201 |
Chain | Residue |
E | ASN20 |
E | ARG64 |
E | SER65 |
E | GLY66 |
E | GLN136 |
E | HOH314 |
E | HOH318 |
E | HOH329 |
E | HOH330 |
E | HOH333 |
E | HOH337 |
E | HOH338 |
F | GLY78 |
F | LYS79 |
F | ASP81 |
F | TYR84 |
F | GLY89 |
F | MG202 |
F | HOH333 |
F | HOH341 |
site_id | BC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE MG F 202 |
Chain | Residue |
E | ASN20 |
E | HOH329 |
E | HOH330 |
E | HOH331 |
F | DUP201 |
site_id | BC5 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MG D 202 |
Chain | Residue |
D | DUP201 |
D | HOH327 |
D | HOH328 |