4GV8
DUTPase from phage phi11 of S.aureus: visualization of the species-specific insert
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0004170 | molecular_function | dUTP diphosphatase activity |
| A | 0006226 | biological_process | dUMP biosynthetic process |
| A | 0009117 | biological_process | nucleotide metabolic process |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0046081 | biological_process | dUTP catabolic process |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0000287 | molecular_function | magnesium ion binding |
| B | 0004170 | molecular_function | dUTP diphosphatase activity |
| B | 0006226 | biological_process | dUMP biosynthetic process |
| B | 0009117 | biological_process | nucleotide metabolic process |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0046081 | biological_process | dUTP catabolic process |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0000287 | molecular_function | magnesium ion binding |
| C | 0004170 | molecular_function | dUTP diphosphatase activity |
| C | 0006226 | biological_process | dUMP biosynthetic process |
| C | 0009117 | biological_process | nucleotide metabolic process |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0046081 | biological_process | dUTP catabolic process |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0000287 | molecular_function | magnesium ion binding |
| D | 0004170 | molecular_function | dUTP diphosphatase activity |
| D | 0006226 | biological_process | dUMP biosynthetic process |
| D | 0009117 | biological_process | nucleotide metabolic process |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0046081 | biological_process | dUTP catabolic process |
| D | 0046872 | molecular_function | metal ion binding |
| E | 0000287 | molecular_function | magnesium ion binding |
| E | 0004170 | molecular_function | dUTP diphosphatase activity |
| E | 0006226 | biological_process | dUMP biosynthetic process |
| E | 0009117 | biological_process | nucleotide metabolic process |
| E | 0016787 | molecular_function | hydrolase activity |
| E | 0046081 | biological_process | dUTP catabolic process |
| E | 0046872 | molecular_function | metal ion binding |
| F | 0000287 | molecular_function | magnesium ion binding |
| F | 0004170 | molecular_function | dUTP diphosphatase activity |
| F | 0006226 | biological_process | dUMP biosynthetic process |
| F | 0009117 | biological_process | nucleotide metabolic process |
| F | 0016787 | molecular_function | hydrolase activity |
| F | 0046081 | biological_process | dUTP catabolic process |
| F | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 24 |
| Details | BINDING SITE FOR RESIDUE DUP A 201 |
| Chain | Residue |
| A | GLY78 |
| A | HOH305 |
| A | HOH316 |
| A | HOH318 |
| A | HOH320 |
| A | HOH378 |
| A | HOH384 |
| B | PHE164 |
| C | ASN20 |
| C | ARG64 |
| C | SER65 |
| A | LYS79 |
| C | GLY66 |
| C | GLN136 |
| C | HOH354 |
| C | HOH355 |
| C | HOH356 |
| A | ILE80 |
| A | ASP81 |
| A | TYR84 |
| A | LEU88 |
| A | GLY89 |
| A | MG202 |
| A | HOH303 |
| site_id | AC2 |
| Number of Residues | 22 |
| Details | BINDING SITE FOR RESIDUE DUP B 201 |
| Chain | Residue |
| A | ASN20 |
| A | ARG64 |
| A | SER65 |
| A | GLY66 |
| A | GLN136 |
| A | HOH308 |
| A | HOH310 |
| A | HOH343 |
| A | HOH346 |
| A | HOH364 |
| A | HOH365 |
| A | HOH366 |
| B | GLY78 |
| B | LYS79 |
| B | ASP81 |
| B | TYR84 |
| B | ASN87 |
| B | LEU88 |
| B | GLY89 |
| B | MG202 |
| B | HOH326 |
| C | PHE164 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG A 203 |
| Chain | Residue |
| A | ASP95 |
| A | HOH372 |
| B | ASP95 |
| B | HOH365 |
| C | ASP95 |
| C | HOH364 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG B 202 |
| Chain | Residue |
| A | HOH364 |
| A | HOH365 |
| A | HOH366 |
| B | DUP201 |
| site_id | AC5 |
| Number of Residues | 25 |
| Details | BINDING SITE FOR RESIDUE DUP C 201 |
| Chain | Residue |
| B | ASN20 |
| B | ARG64 |
| B | SER65 |
| B | GLY66 |
| B | GLN136 |
| B | HOH304 |
| B | HOH305 |
| B | HOH315 |
| B | HOH339 |
| B | HOH360 |
| B | HOH361 |
| B | HOH363 |
| B | HOH368 |
| B | HOH372 |
| B | HOH373 |
| B | HOH377 |
| C | GLY78 |
| C | LYS79 |
| C | ASP81 |
| C | TYR84 |
| C | ASN87 |
| C | LEU88 |
| C | GLY89 |
| C | MG202 |
| C | HOH341 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG C 202 |
| Chain | Residue |
| B | HOH360 |
| B | HOH361 |
| B | HOH363 |
| C | DUP201 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MG A 202 |
| Chain | Residue |
| A | DUP201 |
| C | HOH354 |
| C | HOH355 |
| C | HOH356 |
| site_id | AC8 |
| Number of Residues | 19 |
| Details | BINDING SITE FOR RESIDUE DUP D 201 |
| Chain | Residue |
| D | HOH320 |
| D | HOH327 |
| D | HOH328 |
| E | PHE164 |
| F | ASN20 |
| F | ARG64 |
| F | SER65 |
| F | GLY66 |
| F | GLN136 |
| D | GLY78 |
| D | LYS79 |
| D | ASP81 |
| D | TYR84 |
| D | ASN87 |
| D | LEU88 |
| D | GLY89 |
| D | MG202 |
| D | HOH311 |
| D | HOH317 |
| site_id | AC9 |
| Number of Residues | 15 |
| Details | BINDING SITE FOR RESIDUE DUP E 201 |
| Chain | Residue |
| D | ARG64 |
| D | SER65 |
| D | GLY66 |
| D | GLN136 |
| D | HOH316 |
| D | HOH323 |
| D | HOH331 |
| D | HOH337 |
| E | GLY78 |
| E | LYS79 |
| E | ASP81 |
| E | TYR84 |
| E | GLY89 |
| E | MG202 |
| F | PHE164 |
| site_id | BC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG D 203 |
| Chain | Residue |
| D | ASP95 |
| D | HOH307 |
| E | ASP95 |
| E | HOH306 |
| F | ASP95 |
| F | HOH301 |
| site_id | BC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG E 202 |
| Chain | Residue |
| D | ASP28 |
| D | HOH331 |
| E | DUP201 |
| site_id | BC3 |
| Number of Residues | 20 |
| Details | BINDING SITE FOR RESIDUE DUP F 201 |
| Chain | Residue |
| E | ASN20 |
| E | ARG64 |
| E | SER65 |
| E | GLY66 |
| E | GLN136 |
| E | HOH314 |
| E | HOH318 |
| E | HOH329 |
| E | HOH330 |
| E | HOH333 |
| E | HOH337 |
| E | HOH338 |
| F | GLY78 |
| F | LYS79 |
| F | ASP81 |
| F | TYR84 |
| F | GLY89 |
| F | MG202 |
| F | HOH333 |
| F | HOH341 |
| site_id | BC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG F 202 |
| Chain | Residue |
| E | ASN20 |
| E | HOH329 |
| E | HOH330 |
| E | HOH331 |
| F | DUP201 |
| site_id | BC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE MG D 202 |
| Chain | Residue |
| D | DUP201 |
| D | HOH327 |
| D | HOH328 |
