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4GPU

Crystal structure of K. lactis Dxo1 (YDR370C) in complex with manganese

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000956biological_processnuclear-transcribed mRNA catabolic process
A0003723molecular_functionRNA binding
A0004518molecular_functionnuclease activity
A0004527molecular_functionexonuclease activity
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0008409molecular_function5'-3' exonuclease activity
A0016787molecular_functionhydrolase activity
A0034353molecular_functionmRNA 5'-diphosphatase activity
A0046872molecular_functionmetal ion binding
A0071028biological_processnuclear mRNA surveillance
A0090304biological_processnucleic acid metabolic process
A0110152molecular_functionRNA NAD+-cap (NAD+-forming) hydrolase activity
A0110155biological_processNAD-cap decapping
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MN A 501
ChainResidue
AGLU223
AASP262
AGLU273
AILE274
AHOH601

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"22961381","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues3
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"O70348","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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