4GN5
OBody AM3L15 bound to hen egg-white lysozyme
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003676 | molecular_function | nucleic acid binding |
| B | 0003676 | molecular_function | nucleic acid binding |
| C | 0003796 | molecular_function | lysozyme activity |
| C | 0005515 | molecular_function | protein binding |
| C | 0005576 | cellular_component | extracellular region |
| C | 0005615 | cellular_component | extracellular space |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005783 | cellular_component | endoplasmic reticulum |
| C | 0016231 | molecular_function | beta-N-acetylglucosaminidase activity |
| C | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| C | 0016998 | biological_process | cell wall macromolecule catabolic process |
| C | 0031640 | biological_process | killing of cells of another organism |
| C | 0042742 | biological_process | defense response to bacterium |
| C | 0042802 | molecular_function | identical protein binding |
| C | 0050829 | biological_process | defense response to Gram-negative bacterium |
| C | 0050830 | biological_process | defense response to Gram-positive bacterium |
| C | 0051672 | biological_process | obsolete catabolism by organism of cell wall peptidoglycan in other organism |
| D | 0003796 | molecular_function | lysozyme activity |
| D | 0005515 | molecular_function | protein binding |
| D | 0005576 | cellular_component | extracellular region |
| D | 0005615 | cellular_component | extracellular space |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005783 | cellular_component | endoplasmic reticulum |
| D | 0016231 | molecular_function | beta-N-acetylglucosaminidase activity |
| D | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| D | 0016998 | biological_process | cell wall macromolecule catabolic process |
| D | 0031640 | biological_process | killing of cells of another organism |
| D | 0042742 | biological_process | defense response to bacterium |
| D | 0042802 | molecular_function | identical protein binding |
| D | 0050829 | biological_process | defense response to Gram-negative bacterium |
| D | 0050830 | biological_process | defense response to Gram-positive bacterium |
| D | 0051672 | biological_process | obsolete catabolism by organism of cell wall peptidoglycan in other organism |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EPE C 201 |
| Chain | Residue |
| C | PHE34 |
| C | SER36 |
| C | ASN39 |
| C | ALA42 |
| C | ASN44 |
| C | ARG114 |
| C | HOH383 |
| C | HOH437 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL C 202 |
| Chain | Residue |
| C | ASN65 |
| C | ASN74 |
| C | ASN77 |
| C | ILE78 |
| C | PRO79 |
| B | ASN15 |
| site_id | AC3 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE GOL C 203 |
| Chain | Residue |
| C | LYS1 |
| C | VAL2 |
| C | PHE3 |
| C | GLY4 |
| C | GLU7 |
| C | HOH348 |
| C | HOH361 |
| C | HOH424 |
| D | LYS1 |
| D | VAL2 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EPE C 204 |
| Chain | Residue |
| C | SER81 |
| C | SER85 |
| C | SER86 |
| C | HOH307 |
| C | HOH385 |
| D | CYS6 |
| D | GLY126 |
| site_id | AC5 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE EPE D 201 |
| Chain | Residue |
| D | PHE34 |
| D | SER36 |
| D | ASN39 |
| D | ALA42 |
| D | ASN44 |
| D | HOH321 |
| D | HOH377 |
| D | HOH411 |
| D | HOH439 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL D 202 |
| Chain | Residue |
| C | ARG14 |
| D | ARG14 |
| D | HIS15 |
| D | ASP87 |
| D | ILE88 |
| D | HOH363 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL D 203 |
| Chain | Residue |
| C | ILE78 |
| C | THR89 |
| C | ALA90 |
| C | ASN93 |
| D | ARG128 |
| D | HOH371 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE ACT D 204 |
| Chain | Residue |
| D | ALA122 |
| D | HOH307 |
Functional Information from PROSITE/UniProt
| site_id | PS00128 |
| Number of Residues | 19 |
| Details | GLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC |
| Chain | Residue | Details |
| C | CYS76-CYS94 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | ACT_SITE: |
| Chain | Residue | Details |
| C | GLU35 | |
| C | ASP52 | |
| D | GLU35 | |
| D | ASP52 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | BINDING: |
| Chain | Residue | Details |
| C | ASP101 | |
| D | ASP101 |
Catalytic Information from CSA
| site_id | MCSA1 |
| Number of Residues | 6 |
| Details | M-CSA 203 |
| Chain | Residue | Details |
| C | GLU35 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
| C | ASN46 | |
| C | ASP48 | |
| C | SER50 | |
| C | ASP52 | covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction |
| C | ASN59 |
| site_id | MCSA2 |
| Number of Residues | 6 |
| Details | M-CSA 203 |
| Chain | Residue | Details |
| D | GLU35 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
| D | ASN46 | |
| D | ASP48 | |
| D | SER50 | |
| D | ASP52 | covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction |
| D | ASN59 |
