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4GC9

Crystal structure of murine TFB1M in complex with SAM

Functional Information from GO Data
ChainGOidnamespacecontents
A0000154biological_processrRNA modification
A0000179molecular_functionrRNA (adenine-N6,N6-)-dimethyltransferase activity
A0003677molecular_functionDNA binding
A0003723molecular_functionRNA binding
A0005739cellular_componentmitochondrion
A0005759cellular_componentmitochondrial matrix
A0006364biological_processrRNA processing
A0006391biological_processtranscription initiation at mitochondrial promoter
A0008168molecular_functionmethyltransferase activity
A0016740molecular_functiontransferase activity
A0031167biological_processrRNA methylation
A0032259biological_processmethylation
A0034246molecular_functionmitochondrial transcription factor activity
A0042645cellular_componentmitochondrial nucleoid
A1904047molecular_functionS-adenosyl-L-methionine binding
Functional Information from PDB Data
site_idAC1
Number of Residues19
DetailsBINDING SITE FOR RESIDUE SAM A 401
ChainResidue
AGLN35
ALYS86
AASP87
APHE90
AGLY110
AASP111
AVAL112
AASN141
APRO143
AVAL146
AHOH513
AASN36
APHE37
ALEU38
AGLY63
APRO64
AGLY65
AVAL84
AGLU85

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE ACT A 402
ChainResidue
ALYS258
ATYR259
AARG262

Functional Information from PROSITE/UniProt
site_idPS01131
Number of Residues29
DetailsRRNA_A_DIMETH Ribosomal RNA adenine dimethylases signature. VYEvGPGpGgITrsiLnanvae..LlVVEkD
ChainResidueDetails
AVAL59-ASP87

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"23804760","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"4GC9","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"UniProtKB","id":"Q8WVM0","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

240971

PDB entries from 2025-08-27

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