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4FLY

Pyrococcus abyssi B family DNA polymerase bound to a dsDNA, in edition mode

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006260biological_processDNA replication
A0006261biological_processDNA-templated DNA replication
A0016740molecular_functiontransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
A0071897biological_processDNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 801
ChainResidue
AASP141
AGLU143
AASP315
AHOH944
AHOH946
AHOH948

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 802
ChainResidue
AHOH908
AHOH913
AHOH943
AHOH901
AHOH903
AHOH904

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MES A 803
ChainResidue
AASP6
ATYR7
AHOH904
AHOH1012
TDG1
THOH101

Functional Information from PROSITE/UniProt
site_idPS00116
Number of Residues9
DetailsDNA_POLYMERASE_B DNA polymerase family B signature. YIDTDGLYA
ChainResidueDetails
ATYR538-ALA546

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PDB entries from 2025-12-24

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