4F7U

The 6S snRNP assembly intermediate

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000243	cellular_component	commitment complex
A	0000387	biological_process	spliceosomal snRNP assembly
A	0000398	biological_process	mRNA splicing, via spliceosome
A	0003723	molecular_function	RNA binding
A	0005515	molecular_function	protein binding
A	0005634	cellular_component	nucleus
A	0005681	cellular_component	spliceosomal complex
A	0005682	cellular_component	U5 snRNP
A	0005684	cellular_component	U2-type spliceosomal complex
A	0005685	cellular_component	U1 snRNP
A	0005686	cellular_component	U2 snRNP
A	0005687	cellular_component	U4 snRNP
A	0005689	cellular_component	U12-type spliceosomal complex
A	0005737	cellular_component	cytoplasm
A	0005829	cellular_component	cytosol
A	0006396	biological_process	RNA processing
A	0006397	biological_process	mRNA processing
A	0008380	biological_process	RNA splicing
A	0034693	cellular_component	U11/U12 snRNP
A	0034709	cellular_component	methylosome
A	0034715	cellular_component	pICln-Sm protein complex
A	0034719	cellular_component	SMN-Sm protein complex
A	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
A	0071005	cellular_component	U2-type precatalytic spliceosome
A	0071006	cellular_component	U2-type catalytic step 1 spliceosome
A	0071007	cellular_component	U2-type catalytic step 2 spliceosome
A	0071011	cellular_component	precatalytic spliceosome
A	0071013	cellular_component	catalytic step 2 spliceosome
A	0071014	cellular_component	post-mRNA release spliceosomal complex
A	0071016	cellular_component	U12-type precatalytic spliceosome
A	0071018	cellular_component	U12-type catalytic step 2 spliceosome
A	0071020	cellular_component	post-spliceosomal complex
A	0097526	cellular_component	spliceosomal tri-snRNP complex
A	1990446	molecular_function	U1 snRNP binding
A	1990904	cellular_component	ribonucleoprotein complex
B	0000387	biological_process	spliceosomal snRNP assembly
B	0000398	biological_process	mRNA splicing, via spliceosome
B	0003723	molecular_function	RNA binding
B	0005515	molecular_function	protein binding
B	0005634	cellular_component	nucleus
B	0005681	cellular_component	spliceosomal complex
B	0005682	cellular_component	U5 snRNP
B	0005684	cellular_component	U2-type spliceosomal complex
B	0005685	cellular_component	U1 snRNP
B	0005686	cellular_component	U2 snRNP
B	0005687	cellular_component	U4 snRNP
B	0005689	cellular_component	U12-type spliceosomal complex
B	0005829	cellular_component	cytosol
B	0006397	biological_process	mRNA processing
B	0008380	biological_process	RNA splicing
B	0030532	cellular_component	small nuclear ribonucleoprotein complex
B	0034693	cellular_component	U11/U12 snRNP
B	0034709	cellular_component	methylosome
B	0034715	cellular_component	pICln-Sm protein complex
B	0034719	cellular_component	SMN-Sm protein complex
B	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
B	0071005	cellular_component	U2-type precatalytic spliceosome
B	0071006	cellular_component	U2-type catalytic step 1 spliceosome
B	0071007	cellular_component	U2-type catalytic step 2 spliceosome
B	0071011	cellular_component	precatalytic spliceosome
B	0071013	cellular_component	catalytic step 2 spliceosome
B	0071014	cellular_component	post-mRNA release spliceosomal complex
B	0071016	cellular_component	U12-type precatalytic spliceosome
B	0071018	cellular_component	U12-type catalytic step 2 spliceosome
B	0071020	cellular_component	post-spliceosomal complex
B	0097525	cellular_component	spliceosomal snRNP complex
B	1990446	molecular_function	U1 snRNP binding
B	1990904	cellular_component	ribonucleoprotein complex
C	0000243	cellular_component	commitment complex
C	0000387	biological_process	spliceosomal snRNP assembly
C	0000398	biological_process	mRNA splicing, via spliceosome
C	0003723	molecular_function	RNA binding
C	0005515	molecular_function	protein binding
C	0005634	cellular_component	nucleus
C	0005681	cellular_component	spliceosomal complex
C	0005682	cellular_component	U5 snRNP
C	0005684	cellular_component	U2-type spliceosomal complex
C	0005685	cellular_component	U1 snRNP
C	0005686	cellular_component	U2 snRNP
C	0005687	cellular_component	U4 snRNP
C	0005689	cellular_component	U12-type spliceosomal complex
C	0005737	cellular_component	cytoplasm
C	0005829	cellular_component	cytosol
C	0006396	biological_process	RNA processing
C	0006397	biological_process	mRNA processing
C	0008380	biological_process	RNA splicing
C	0034693	cellular_component	U11/U12 snRNP
C	0034709	cellular_component	methylosome
C	0034715	cellular_component	pICln-Sm protein complex
C	0034719	cellular_component	SMN-Sm protein complex
C	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
C	0071005	cellular_component	U2-type precatalytic spliceosome
C	0071006	cellular_component	U2-type catalytic step 1 spliceosome
C	0071007	cellular_component	U2-type catalytic step 2 spliceosome
C	0071011	cellular_component	precatalytic spliceosome
C	0071013	cellular_component	catalytic step 2 spliceosome
C	0071014	cellular_component	post-mRNA release spliceosomal complex
C	0071016	cellular_component	U12-type precatalytic spliceosome
C	0071018	cellular_component	U12-type catalytic step 2 spliceosome
C	0071020	cellular_component	post-spliceosomal complex
C	0097526	cellular_component	spliceosomal tri-snRNP complex
C	1990446	molecular_function	U1 snRNP binding
C	1990904	cellular_component	ribonucleoprotein complex
D	0000387	biological_process	spliceosomal snRNP assembly
D	0000398	biological_process	mRNA splicing, via spliceosome
D	0003723	molecular_function	RNA binding
D	0005515	molecular_function	protein binding
D	0005634	cellular_component	nucleus
D	0005681	cellular_component	spliceosomal complex
D	0005682	cellular_component	U5 snRNP
D	0005684	cellular_component	U2-type spliceosomal complex
D	0005685	cellular_component	U1 snRNP
D	0005686	cellular_component	U2 snRNP
D	0005687	cellular_component	U4 snRNP
D	0005689	cellular_component	U12-type spliceosomal complex
D	0005829	cellular_component	cytosol
D	0006397	biological_process	mRNA processing
D	0008380	biological_process	RNA splicing
D	0030532	cellular_component	small nuclear ribonucleoprotein complex
D	0034693	cellular_component	U11/U12 snRNP
D	0034709	cellular_component	methylosome
D	0034715	cellular_component	pICln-Sm protein complex
D	0034719	cellular_component	SMN-Sm protein complex
D	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
D	0071005	cellular_component	U2-type precatalytic spliceosome
D	0071006	cellular_component	U2-type catalytic step 1 spliceosome
D	0071007	cellular_component	U2-type catalytic step 2 spliceosome
D	0071011	cellular_component	precatalytic spliceosome
D	0071013	cellular_component	catalytic step 2 spliceosome
D	0071014	cellular_component	post-mRNA release spliceosomal complex
D	0071016	cellular_component	U12-type precatalytic spliceosome
D	0071018	cellular_component	U12-type catalytic step 2 spliceosome
D	0071020	cellular_component	post-spliceosomal complex
D	0097525	cellular_component	spliceosomal snRNP complex
D	1990446	molecular_function	U1 snRNP binding
D	1990904	cellular_component	ribonucleoprotein complex
E	0000387	biological_process	spliceosomal snRNP assembly
E	0000398	biological_process	mRNA splicing, via spliceosome
E	0003723	molecular_function	RNA binding
E	0005634	cellular_component	nucleus
E	0005681	cellular_component	spliceosomal complex
E	0005682	cellular_component	U5 snRNP
E	0005683	cellular_component	U7 snRNP
E	0005684	cellular_component	U2-type spliceosomal complex
E	0005685	cellular_component	U1 snRNP
E	0005686	cellular_component	U2 snRNP
E	0005687	cellular_component	U4 snRNP
E	0005689	cellular_component	U12-type spliceosomal complex
E	0005697	cellular_component	telomerase holoenzyme complex
E	0005829	cellular_component	cytosol
E	0006397	biological_process	mRNA processing
E	0008380	biological_process	RNA splicing
E	0034693	cellular_component	U11/U12 snRNP
E	0034709	cellular_component	methylosome
E	0034715	cellular_component	pICln-Sm protein complex
E	0034719	cellular_component	SMN-Sm protein complex
E	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
E	0071005	cellular_component	U2-type precatalytic spliceosome
E	0071006	cellular_component	U2-type catalytic step 1 spliceosome
E	0071007	cellular_component	U2-type catalytic step 2 spliceosome
E	0071011	cellular_component	precatalytic spliceosome
E	0071013	cellular_component	catalytic step 2 spliceosome
E	0071014	cellular_component	post-mRNA release spliceosomal complex
E	0071016	cellular_component	U12-type precatalytic spliceosome
E	0071018	cellular_component	U12-type catalytic step 2 spliceosome
E	0071020	cellular_component	post-spliceosomal complex
E	1990446	molecular_function	U1 snRNP binding
E	1990904	cellular_component	ribonucleoprotein complex
F	0000387	biological_process	spliceosomal snRNP assembly
F	0000398	biological_process	mRNA splicing, via spliceosome
F	0003723	molecular_function	RNA binding
F	0005634	cellular_component	nucleus
F	0005681	cellular_component	spliceosomal complex
F	0005684	cellular_component	U2-type spliceosomal complex
F	0005685	cellular_component	U1 snRNP
F	0005687	cellular_component	U4 snRNP
F	0005829	cellular_component	cytosol
F	0006397	biological_process	mRNA processing
F	0008380	biological_process	RNA splicing
F	0022618	biological_process	protein-RNA complex assembly
F	0034709	cellular_component	methylosome
F	0034715	cellular_component	pICln-Sm protein complex
F	0034719	cellular_component	SMN-Sm protein complex
F	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
F	0071005	cellular_component	U2-type precatalytic spliceosome
F	0071007	cellular_component	U2-type catalytic step 2 spliceosome
F	0071013	cellular_component	catalytic step 2 spliceosome
F	1990904	cellular_component	ribonucleoprotein complex
G	0000387	biological_process	spliceosomal snRNP assembly
G	0000398	biological_process	mRNA splicing, via spliceosome
G	0003723	molecular_function	RNA binding
G	0005634	cellular_component	nucleus
G	0005654	cellular_component	nucleoplasm
G	0005681	cellular_component	spliceosomal complex
G	0005682	cellular_component	U5 snRNP
G	0005683	cellular_component	U7 snRNP
G	0005684	cellular_component	U2-type spliceosomal complex
G	0005685	cellular_component	U1 snRNP
G	0005686	cellular_component	U2 snRNP
G	0005687	cellular_component	U4 snRNP
G	0005689	cellular_component	U12-type spliceosomal complex
G	0005829	cellular_component	cytosol
G	0006397	biological_process	mRNA processing
G	0008380	biological_process	RNA splicing
G	0030532	cellular_component	small nuclear ribonucleoprotein complex
G	0034693	cellular_component	U11/U12 snRNP
G	0034709	cellular_component	methylosome
G	0034719	cellular_component	SMN-Sm protein complex
G	0043186	cellular_component	P granule
G	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
G	0071004	cellular_component	U2-type prespliceosome
G	0071005	cellular_component	U2-type precatalytic spliceosome
G	0071006	cellular_component	U2-type catalytic step 1 spliceosome
G	0071007	cellular_component	U2-type catalytic step 2 spliceosome
G	0071011	cellular_component	precatalytic spliceosome
G	0071013	cellular_component	catalytic step 2 spliceosome
G	0071014	cellular_component	post-mRNA release spliceosomal complex
G	0071016	cellular_component	U12-type precatalytic spliceosome
G	0071018	cellular_component	U12-type catalytic step 2 spliceosome
G	0071020	cellular_component	post-spliceosomal complex
G	0097526	cellular_component	spliceosomal tri-snRNP complex
G	1990446	molecular_function	U1 snRNP binding
G	1990904	cellular_component	ribonucleoprotein complex
H	0000387	biological_process	spliceosomal snRNP assembly
H	0000398	biological_process	mRNA splicing, via spliceosome
H	0003723	molecular_function	RNA binding
H	0005634	cellular_component	nucleus
H	0005681	cellular_component	spliceosomal complex
H	0005682	cellular_component	U5 snRNP
H	0005683	cellular_component	U7 snRNP
H	0005684	cellular_component	U2-type spliceosomal complex
H	0005685	cellular_component	U1 snRNP
H	0005686	cellular_component	U2 snRNP
H	0005687	cellular_component	U4 snRNP
H	0005689	cellular_component	U12-type spliceosomal complex
H	0005697	cellular_component	telomerase holoenzyme complex
H	0005829	cellular_component	cytosol
H	0006397	biological_process	mRNA processing
H	0008380	biological_process	RNA splicing
H	0034693	cellular_component	U11/U12 snRNP
H	0034709	cellular_component	methylosome
H	0034715	cellular_component	pICln-Sm protein complex
H	0034719	cellular_component	SMN-Sm protein complex
H	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
H	0071005	cellular_component	U2-type precatalytic spliceosome
H	0071006	cellular_component	U2-type catalytic step 1 spliceosome
H	0071007	cellular_component	U2-type catalytic step 2 spliceosome
H	0071011	cellular_component	precatalytic spliceosome
H	0071013	cellular_component	catalytic step 2 spliceosome
H	0071014	cellular_component	post-mRNA release spliceosomal complex
H	0071016	cellular_component	U12-type precatalytic spliceosome
H	0071018	cellular_component	U12-type catalytic step 2 spliceosome
H	0071020	cellular_component	post-spliceosomal complex
H	1990446	molecular_function	U1 snRNP binding
H	1990904	cellular_component	ribonucleoprotein complex
I	0000387	biological_process	spliceosomal snRNP assembly
I	0000398	biological_process	mRNA splicing, via spliceosome
I	0003723	molecular_function	RNA binding
I	0005634	cellular_component	nucleus
I	0005681	cellular_component	spliceosomal complex
I	0005684	cellular_component	U2-type spliceosomal complex
I	0005685	cellular_component	U1 snRNP
I	0005687	cellular_component	U4 snRNP
I	0005829	cellular_component	cytosol
I	0006397	biological_process	mRNA processing
I	0008380	biological_process	RNA splicing
I	0022618	biological_process	protein-RNA complex assembly
I	0034709	cellular_component	methylosome
I	0034715	cellular_component	pICln-Sm protein complex
I	0034719	cellular_component	SMN-Sm protein complex
I	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
I	0071005	cellular_component	U2-type precatalytic spliceosome
I	0071007	cellular_component	U2-type catalytic step 2 spliceosome
I	0071013	cellular_component	catalytic step 2 spliceosome
I	1990904	cellular_component	ribonucleoprotein complex
J	0000387	biological_process	spliceosomal snRNP assembly
J	0000398	biological_process	mRNA splicing, via spliceosome
J	0003723	molecular_function	RNA binding
J	0005634	cellular_component	nucleus
J	0005654	cellular_component	nucleoplasm
J	0005681	cellular_component	spliceosomal complex
J	0005682	cellular_component	U5 snRNP
J	0005683	cellular_component	U7 snRNP
J	0005684	cellular_component	U2-type spliceosomal complex
J	0005685	cellular_component	U1 snRNP
J	0005686	cellular_component	U2 snRNP
J	0005687	cellular_component	U4 snRNP
J	0005689	cellular_component	U12-type spliceosomal complex
J	0005829	cellular_component	cytosol
J	0006397	biological_process	mRNA processing
J	0008380	biological_process	RNA splicing
J	0030532	cellular_component	small nuclear ribonucleoprotein complex
J	0034693	cellular_component	U11/U12 snRNP
J	0034709	cellular_component	methylosome
J	0034719	cellular_component	SMN-Sm protein complex
J	0043186	cellular_component	P granule
J	0046540	cellular_component	U4/U6 x U5 tri-snRNP complex
J	0071004	cellular_component	U2-type prespliceosome
J	0071005	cellular_component	U2-type precatalytic spliceosome
J	0071006	cellular_component	U2-type catalytic step 1 spliceosome
J	0071007	cellular_component	U2-type catalytic step 2 spliceosome
J	0071011	cellular_component	precatalytic spliceosome
J	0071013	cellular_component	catalytic step 2 spliceosome
J	0071014	cellular_component	post-mRNA release spliceosomal complex
J	0071016	cellular_component	U12-type precatalytic spliceosome
J	0071018	cellular_component	U12-type catalytic step 2 spliceosome
J	0071020	cellular_component	post-spliceosomal complex
J	0097526	cellular_component	spliceosomal tri-snRNP complex
J	1990446	molecular_function	U1 snRNP binding
J	1990904	cellular_component	ribonucleoprotein complex
P	0000387	biological_process	spliceosomal snRNP assembly
P	0005829	cellular_component	cytosol
P	0005886	cellular_component	plasma membrane
P	0006821	biological_process	chloride transport
P	0006884	biological_process	cell volume homeostasis
P	0034709	cellular_component	methylosome
P	0034715	cellular_component	pICln-Sm protein complex
Q	0000387	biological_process	spliceosomal snRNP assembly
Q	0005829	cellular_component	cytosol
Q	0005886	cellular_component	plasma membrane
Q	0006821	biological_process	chloride transport
Q	0006884	biological_process	cell volume homeostasis
Q	0034709	cellular_component	methylosome
Q	0034715	cellular_component	pICln-Sm protein complex

Functional Information from PDB Data

site_id	AC1
Number of Residues	7
Details	BINDING SITE FOR RESIDUE P6G H 3101

Chain	Residue
F	THR4015
F	GLY4016
F	LYS4017
H	PHE3050
H	ASP3051
H	GLU3052
I	ASN4006

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	144
Details	Domain: {"description":"Sm","evidences":[{"source":"PROSITE-ProRule","id":"PRU01346","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI2
Number of Residues	79
Details	Region: {"description":"Sufficient for interaction with CLNS1A","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

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